| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3494 |
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| Symbol | |
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| ID | 4665309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3861825 |
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| End bp | 3862499 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639824688 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_971823 |
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| Protein GI | 120612145 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1278] Cold shock proteins
[COG3326] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0199101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.508028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTTCG ACGGCGTCAT CGCGTCCTGG AACGACGCGC GGGGTTTCGG CTTCATCGAG
CCGCTGCAGG GCGGCGATCC GGTGTTCGTG CACATCAAGG CCTTCCAGGG CGGCGCGCCC
CGGCCCCAGG CCGGCCAGCG GGTGCGCTTC GCCGTGGAGG CCGGCCCCGG CGGCCGCAAG
CGGGCCTGCC GCGTCGAATC CCTGCCGCCC GCGGCGCGCG CGTCCGCCGC CCGGGCGCCC
GCCATGGCGC CCCGGCCGGC CCGTCCCCGC GGCCGCCACG GGGCGCACGG CGGCTCCGCG
CCATGGGGCA CCGCGAGCCT GCTCGTGCTG CCGGCCTATG CCGTGTACTG CGTGGCGTTG
GCGGTCTTCG GCACGATGCC CCGCTGGTTT CCGGCGGCCT GCCTGGGCCT GAGCGCCTGG
ACCTACCTCG TGTACTGGCG GGACAAGCGG GCCGCGGAAC AGGCGGCCTG GCGCACGTCC
GAGAAGACCC TGCATCTGCT GGCGCTGGCC GGAGGCTGGC CCGGGGCCCT GCTGGCGCAG
CAGGTGCTGC GCCACAAGTC CGCCAAGCGG CCCTTCCGCA TCGTGTTCTG GGCCACCGTG
GTGCTCCATG CCGCGGCGCT CGGCTGGCTG TGCTCGCCGC ACGGCCATGG CCTGCGCGCG
GCCCTGCCTG CCTGA
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| Protein sequence | MQFDGVIASW NDARGFGFIE PLQGGDPVFV HIKAFQGGAP RPQAGQRVRF AVEAGPGGRK
RACRVESLPP AARASAARAP AMAPRPARPR GRHGAHGGSA PWGTASLLVL PAYAVYCVAL
AVFGTMPRWF PAACLGLSAW TYLVYWRDKR AAEQAAWRTS EKTLHLLALA GGWPGALLAQ
QVLRHKSAKR PFRIVFWATV VLHAAALGWL CSPHGHGLRA ALPA
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