| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3492 |
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| Symbol | |
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| ID | 4666030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3859610 |
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| End bp | 3860860 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639824686 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_971821 |
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| Protein GI | 120612143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.193328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.492454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CTTCCCTGCC CCGCGATGCC GCCGAAGCCC CGGCGTCCGC CTCTTCCACG
GCCACTCCAC GTCCGCGGGA CGACCGCACC CTGCTGCGCG CCGTGCTCGC GCTGGGCCTG
GGCGGCTTTT CCATCGGCAC GGGCGAATTC GTCATCATGG GCCTGCTGCC CGAGGTGGCG
CGGGATATCG GCGTGACCAT CCCGCAGGCC GGGCATGTCA TCAGCGCCTA TGCGCTGGGC
GTGGTCATCG GCGCGCCCGT GCTGGCCGTG CTCGCGGCGC GCTGGGGCCG GCGCGCACTG
CTCATCGCGC TGATGGCCGT CTATGCGCTG GGCAATTTCG CCTCCGCGAT GGCGCCGGGC
TACCTGTCGC TGAACCTGCT GCGCTTCGTC ACCGGCCTGC CGCACGGCAC CTATTTCGGA
GTGGCCGCGC TGGTGGCCGC GTCGCTCGCA CCGCCGGGCC GGCGCGCGAG CGCGGTGGGC
CTGGTGATGC TGGGCCTGAC GGGGGCCACG CTCGCGGGCG TGCCCATCGC GGCGGCGCTG
GGCCAGCATT TCGGCTGGCG CGCGGCCTTC GTGTTCGTCG GGGCGATCGC GGTGCTGGCG
ATGGCGATGG TGCGCCGGGG CGTGCCCTAC ATGCCGCCCG ACGCGGCCGC GAGCCCCTGG
CGGGAGCTCG GGGCGCTGCG GCGCAAGCAG GTCTGGCTCA CGCTCGGCAT CGGGGCCATC
GGCTTCGGCG GCATGTTCTC GGTCTTCAGC TACATCAAGC CCACGCTCAC CGAAGTGGCG
GGCTTGCCCG TCGGCGGCGT GCCTTTCGTG CTGGCGCTCT TCGGCGCGGG CATGGTGGCG
GGCAACCTCG TGGGCGCCCG GCTGGCGGAT CGTGCCCTGA TGCGCACCAT CGGCGGCCTG
CTGGGCTGGT CGGTGGCGGT ACTGGGCGGC TTCGTCTTCG CCGCGCACCA CGTGGTCACG
GCGGCGGTGG CGACCTTTCT CCTCGGGACC ATCGTGGCCA TCGGACCGGC CCTGCAGATC
CGGCTCATGG ACGTGGCCGG CGACGCGCAG ACCCTGGCCG CCGCGCTCAA CCATTCGGCC
TTCAACTGCG CGAACGCGCT CGGCGCCTGG CTGGGCGGCG TGGCCATCGC GGCCGGCCTG
GGCTGGACGT CCACCGGCTG GGTGGGCGTG CTGCTCGCCA TCGGCGGGCT GGCCGTGTTC
GCCGCATCGC TGGCCGCGCA GCGCAGCGCC TCCCGGCCGC CCGCGCCCTG A
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| Protein sequence | MTTPSLPRDA AEAPASASST ATPRPRDDRT LLRAVLALGL GGFSIGTGEF VIMGLLPEVA
RDIGVTIPQA GHVISAYALG VVIGAPVLAV LAARWGRRAL LIALMAVYAL GNFASAMAPG
YLSLNLLRFV TGLPHGTYFG VAALVAASLA PPGRRASAVG LVMLGLTGAT LAGVPIAAAL
GQHFGWRAAF VFVGAIAVLA MAMVRRGVPY MPPDAAASPW RELGALRRKQ VWLTLGIGAI
GFGGMFSVFS YIKPTLTEVA GLPVGGVPFV LALFGAGMVA GNLVGARLAD RALMRTIGGL
LGWSVAVLGG FVFAAHHVVT AAVATFLLGT IVAIGPALQI RLMDVAGDAQ TLAAALNHSA
FNCANALGAW LGGVAIAAGL GWTSTGWVGV LLAIGGLAVF AASLAAQRSA SRPPAP
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