| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3490 |
|---|
| Symbol | |
|---|
| ID | 4666133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3857206 |
|---|
| End bp | 3858324 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639824684 |
|---|
| Product | diacylglycerol kinase, catalytic region |
|---|
| Protein accession | YP_971819 |
|---|
| Protein GI | 120612141 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.504885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCT CCGTTCCGAC ATCCTCTCCC GCCGCGCCCG GACCCGGGCC CGTGCATCTG
GTGGTGCCGC ACCGGCCGGG CGCGGACCAC CACCAGCTGC GGGGCCGGCT GGAGGCCCTC
GAACCACTGC GCCGCCACGC GGTGCAGTGG CACGTGCCGG CAGTGCGCGC CGGCATCGTG
CAGGCGGCCG ACGAAGCGGC GCGGGCCGCG CGGGCCTCGG GCGGCATCGT CGTGGCCTGC
GGCGGCGACG GCACCATCAA TGCGGTGGCC GCGGCGGCCT GGCGGCACGG CGTCCGCATG
GGCGTCATTC CCGCGGGCAC GTTCAACTAC TTCGCGCGGG AGCAGAGCCT GTCGCTGGAC
CTCGCCCAGG CGGCCGAGGA CATCCTGCGG GCGCTGCGCG ACGGTGACGA GCGGCCGGTG
CGCGTGGGCT GGGTGAACGA CAGCATGTTC CTCGTGAATG CCGCGGTCGG GCTGTATCCG
CGCCTGCTCG AGCAGCGGGA GATGGCGTCC CGGCGCTTCG GCCGTTCCCG CTGGGTGGCG
ATCGTTTCCG CCGTCTGGAG CTTCCTGCGG CCCTCGTCGG CGCGGCGCTG GCGGGTGTCG
CTGCGCGCCC ACCGCGGCGC GGACACGCTG GTGCAGGAGG AGTTCTTCGC CTCCACGCTG
TTCGTCGGCA ACAACCCGCT GCAGCTCGGG CGGCTGGGCA TTCCCCAGGC GCGCGACGTG
GCCGAAGGGG ACCACCTCGC GGTACTGCTG CTCAAGCCGC AGGGCCGCTG GGCCACCGCC
CGCACGGTCT GGCATGCCGC CATCGGCCAG CTCGACCGCG ACGCAGCCGT CATCAGCCTG
GCCTGCTCCG AGATGGTGGT GGAGCCCGCC AGCTGGCGCC CCGTCCAGGT CAAGGTGGCG
TTCGACGGCG AGCGCGCCTG GATGCCGCCG CCGCTGCGCT TTCGCGTGGA AGACCGGCCG
CTGTGGCTCG TGGCCCCCAC GGCGACGGCC AGGGACGAGG AGGGCGCCAT GCGCCCGGCC
CTCGCTCCCG AGCCGGAAGC CGACCCCGGG GAGGCGCCCC CCCCGGGCGT TGCCCCCCTG
CCGGGCGCGG TGCCAGGCAT GGCCGCGGCC ATCTCCTGA
|
|---|
| Protein sequence | MPTSVPTSSP AAPGPGPVHL VVPHRPGADH HQLRGRLEAL EPLRRHAVQW HVPAVRAGIV
QAADEAARAA RASGGIVVAC GGDGTINAVA AAAWRHGVRM GVIPAGTFNY FAREQSLSLD
LAQAAEDILR ALRDGDERPV RVGWVNDSMF LVNAAVGLYP RLLEQREMAS RRFGRSRWVA
IVSAVWSFLR PSSARRWRVS LRAHRGADTL VQEEFFASTL FVGNNPLQLG RLGIPQARDV
AEGDHLAVLL LKPQGRWATA RTVWHAAIGQ LDRDAAVISL ACSEMVVEPA SWRPVQVKVA
FDGERAWMPP PLRFRVEDRP LWLVAPTATA RDEEGAMRPA LAPEPEADPG EAPPPGVAPL
PGAVPGMAAA IS
|
|---|
| |