| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3487 |
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| Symbol | |
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| ID | 4668839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3852471 |
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| End bp | 3855131 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824681 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_971816 |
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| Protein GI | 120612138 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.468356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG TATCGGTCCG CCTGCGCTGG GCCGTGTTCT CGACGGTCGC GGTGCTCGTG
CTCGGGATCG CTGGGGCCGC CGGGGGACTG GTCGTGAACG CCCGGCATGT GGCCGTGGCG
GAGAGCGAAA CGCAGGTGAC GCGCTTCACC GCGGGCGCCG AAGCGGCCCT GAACCGCGCG
CTGCTGGGCC TGGACGTCCT GCTGGCCAGC ACGGACGACA TGATCGATCT GTGGAGCGAC
CGCATGCCCC GCTCCGATCC GGAATTCATC GGCAAGCTGC TGCGCAGCGC ATCCCGGCAG
AACATCCTCG TGCGGTCCGC GGTGCTGCTG GATCCGCGGC GCAACGTGGT GGCCGCGTCG
GACGCCATGG GAGCCCGCAT GCTCCAGGAG CTTCCGGCCG GTTTCTTCGA CGAAGCCATG
GCCCAGGGCA TGCCCACCCT GGCGCTGAGC GCCCCCACGG TCAGCTTCGC CAGCTCGGAG
CGGATCCTGT ATGCGGCCCG GCCCATCCGG TCGGCCGGCG GAGAGCGCCT GCTGGCGGTG
CTGCAGGTGC CCGTGAGCAT GCTGTCCGCG GTACTGGCCC AGGGGGCGGA CATCCCCGGG
CTGGAAGTCA CCCTGGAGCG CGGTAAGGGC GAACTGATCA TCGGCACTTC CGGCCGCGGC
GAGGCGCGCA GCCGGGCGCG CGTTCCCCCG CTGGGCGACG AGGCCCCGGC GTCCATCGCC
TGGGACCAGC CCGCGCGCCT GTCCGGGGTG CCCTCCCTGG TGGCCGCCCG GCCCATTCTC
TACCCGGGCC TCTGGATCAC GGCGAGCCTG CCCGAGGCAT CGGCCCTGGC CAGCTGGCGC
ACCGAGCGCA GCGCCATCGC CGCGGTCGCG GCCCTGCTGA TCGCCACCGC GCTGGCGGCG
GGGGGCTTCA CCATGGCCTA CCTGCGCCGC ATCAGCCATG CGCGCAACGA CCTCGCGCGT
TCCAAGGCCA CGCTCGAGCA GGCCCTGGGC TCCATGGTCA GCGGCTTCGT GCTGCTGGAT
TCCCGCCACC GCGTGCTGCA GTGGAACCAG CGCTACGAAG AGATCTTTCC GTGGCTGCGG
TCCATGATGC AAGTGGGTCT GCCGTTCCGC TCCGTGCTCG AGGCCACTTC GCGCTACCAC
CTGCCCGACG CCGACGAGGC CATGCGCCGC GAGTGGGTCG AGCAGCGGCT GCTGCTGCAG
CGCGAAACCC GCGGCACGCA CGAGCAGATG CTGCCCAACG GCCACTTCAT CCAGATCACC
GAGCGCGCCA CGCCCGAAGG CGGGCTCATG ATCACCTACC ACGACGTGAC GGAAATGCGC
CGGGCCAGCG CCGAGATCGA GAGCCTCGCC TTCTACGACC CGCTCACCGG CCTGCCCAAC
CGGCGGCTGC TGCTCGACCG GCTGCACCAG GCACTCGCCA CCGCGCAACG GTCCCGCCAG
TTCGGCGCGC TGCTCTTCCT GGACCTGGAC CAGTTCAAGA CCCTCAACGA CACGCAGGGC
CATGAGATGG GCGACCTGCT GCTGCAGCAG GTGGCGCTGC GGCTGCGTGT CTGCGCGCGC
CCGGCGGACA CCGTGGCGCG CCTGGGGGGC GACGAGTTCG TGGTGATGAT GAGCGACCTG
TCCCACGACC GGCAGGAAGC CGCGTCGATC ACGCGGCGCA TCGGCGAGAA GATCCTGCAA
GCCGTCGCCC AGCCCTACCA CCTGCAGCAG CAGATGCACC AGCACACCTG CAGCGTGGGC
GCCGCCATCT TCGGCGACCA GCGGCAGACC GCGGCCGACC TGCTCAAGCA GGCGGACATC
GCCATGTACC AGGTCAAGGC GCGGCGCGGC AATGCGCTGT GCTTCTTCGA TCCGCAGATG
CAGGTCGTCA TCAGCCAGCG GGCGCGGCTC GAAACCGACC TGCAGGCCGC CATCGCCGCG
CAGGAATTCG TGCTGTATTA CCAGCCGCAA TTCTCCCGGG CGGGAGAGGT GATCGGGGCC
GAAGGGCTGC TGCGCTGGAA GCATCCCGGG CGGGGCCTGA TCGCCCCCGG CGAATTCATC
GGCGTGGCGG AGGAAAGCGA GCTCATCGTG CCGATCGGCC AGTGGGTATT GCGCACGGCC
TGCGTGCAGC TCGCCGCCTG GAGCCGCGAC CCCCGGCTCG CGCACCTGCA CGTCGCGGTG
AACGTCAGTG CGCGGCAGTT CCGCCATCCG GACTTCGTCG CCAGCGTGGT CGAGGCCCTG
CAGCATGCGG GCGTGAAGCC CCACCTGCTG GAGCTGGAGC TGACGGAATC CCTGGTGCTC
GACAATGTGG ACGACTCCGT CGCCAAGATG CACCTGCTGC GCACCAAGGG CGTGCGCTTC
TCGGTGGACG ATTTCGGCAC GGGCTACTCG TCGCTGGCCT ACCTCACCCG CCTGCCGCTG
CACCAGTTGA AGATCGACCA GTCCTTCGTG CGCAACCTGG GCAAGCGGCC CACGGACGAC
GTGATCGTGC AGACCATCAT CGGCATGGCC CGCAACCTCG ACCTGGAGGT CATCGCCGAG
GGCGTGGAAA CCCAGGAGCA GCGCGATTTC CTGGACCGGC ACGGCTGCGA CCTCTACCAG
GGCTACCTGT TCGCGCGGCC CATGCCCGCG CAGGATTTCC TGGTGCGCTA CGGCTCCGCC
GCCCCGGATC AGACCGCCTG A
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| Protein sequence | MAAVSVRLRW AVFSTVAVLV LGIAGAAGGL VVNARHVAVA ESETQVTRFT AGAEAALNRA
LLGLDVLLAS TDDMIDLWSD RMPRSDPEFI GKLLRSASRQ NILVRSAVLL DPRRNVVAAS
DAMGARMLQE LPAGFFDEAM AQGMPTLALS APTVSFASSE RILYAARPIR SAGGERLLAV
LQVPVSMLSA VLAQGADIPG LEVTLERGKG ELIIGTSGRG EARSRARVPP LGDEAPASIA
WDQPARLSGV PSLVAARPIL YPGLWITASL PEASALASWR TERSAIAAVA ALLIATALAA
GGFTMAYLRR ISHARNDLAR SKATLEQALG SMVSGFVLLD SRHRVLQWNQ RYEEIFPWLR
SMMQVGLPFR SVLEATSRYH LPDADEAMRR EWVEQRLLLQ RETRGTHEQM LPNGHFIQIT
ERATPEGGLM ITYHDVTEMR RASAEIESLA FYDPLTGLPN RRLLLDRLHQ ALATAQRSRQ
FGALLFLDLD QFKTLNDTQG HEMGDLLLQQ VALRLRVCAR PADTVARLGG DEFVVMMSDL
SHDRQEAASI TRRIGEKILQ AVAQPYHLQQ QMHQHTCSVG AAIFGDQRQT AADLLKQADI
AMYQVKARRG NALCFFDPQM QVVISQRARL ETDLQAAIAA QEFVLYYQPQ FSRAGEVIGA
EGLLRWKHPG RGLIAPGEFI GVAEESELIV PIGQWVLRTA CVQLAAWSRD PRLAHLHVAV
NVSARQFRHP DFVASVVEAL QHAGVKPHLL ELELTESLVL DNVDDSVAKM HLLRTKGVRF
SVDDFGTGYS SLAYLTRLPL HQLKIDQSFV RNLGKRPTDD VIVQTIIGMA RNLDLEVIAE
GVETQEQRDF LDRHGCDLYQ GYLFARPMPA QDFLVRYGSA APDQTA
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