Gene Aave_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3484 
Symbol 
ID4665389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3848525 
End bp3849517 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content74% 
IMG OID639824678 
Producthypothetical protein 
Protein accessionYP_971813 
Protein GI120612135 
COG category[S] Function unknown 
COG ID[COG5351] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.341689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA ACCTGACGCC CTTCGCCGCG GAGCTGCTGC CGGGCCACCG GCCGGACGGC 
AGCGCGTGCC GGACGCTGGT CATCAAGGCC ACGCTGGATT TCGCCGGCCG GCCCGTCGCC
CAGGGCGGCG CATTGCCCAT CTACCGCGGC GACGCGTTTT TCGCGGAGGA CGGGCTGCAG
GGCACCGTGC GGCACGAGGC CGACCTCGCC CCCTTCAAGC CGCGGGTGGA CGTGGTGTTC
AACGGCTTCG CCTACGCGCC CGGAGGCCGT CCGGCGGACC GCTTCGACGC GGGCCTGTCC
ATCGGCGCGG AAACCCGCAC GGTGCGCGTC CACGGGCGGC GCGTGTGGCG CCGGCGCATG
GGACTGTTCC CCGTGGCGGA GGCCTGCGAG CCGGCGCTGC GCGTGCCGCT GGTGTACGGC
CTCGCCTTCG GCGGACAGGA CGCGGAAGAC CCGATGGCCT TCCATGCCGG CAATCCGTCG
GGCACCGGCT TCAGCGCCGG GGTGCCGCGG GACGGCGCGC CGCTGCACCA GATCGAGTGG
GCGGATGCGC CCGTGCGCCT GCCCTCCGGC AATGACCCGC CCGCGGGCTT CGGCTGCATC
GGACGCACGT GGCTGCCCCG CCGCGCCCTG TGGGGCAGCT ATGCCCCGCA GGAGCTGCAG
CAGGCGCCCG GCCTCGTGGC GCGCATGCCG GCCACCTTCG ATCCGGCGGC CTGGAACTGC
GCGCACCCGC GCATGCAGTT CGCGCCGGGA CAGGTCCGGC CGGGCACGCG CATCCGCTGG
AAGCACCTGT GCGCCCATGG CGAGGGGGAA ACCGCCGTGC CGGACCTGCA GCCGGCCGTG
TCCTGGGCGG TGCGGGGCGA GCGCGGCACC GTCCGCCCCG CGTTCGACAC CCTCGTGCTG
GAGCCCGAGC ACGGCCACAT GGTGGTGGTC TGGCGCCACA CGTTCGACAG GGAAGCCGCC
CGGTACCTGG AAAGCCTGCA GGTGCATCTC TGA
 
Protein sequence
MLDNLTPFAA ELLPGHRPDG SACRTLVIKA TLDFAGRPVA QGGALPIYRG DAFFAEDGLQ 
GTVRHEADLA PFKPRVDVVF NGFAYAPGGR PADRFDAGLS IGAETRTVRV HGRRVWRRRM
GLFPVAEACE PALRVPLVYG LAFGGQDAED PMAFHAGNPS GTGFSAGVPR DGAPLHQIEW
ADAPVRLPSG NDPPAGFGCI GRTWLPRRAL WGSYAPQELQ QAPGLVARMP ATFDPAAWNC
AHPRMQFAPG QVRPGTRIRW KHLCAHGEGE TAVPDLQPAV SWAVRGERGT VRPAFDTLVL
EPEHGHMVVV WRHTFDREAA RYLESLQVHL