| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3480 |
|---|
| Symbol | |
|---|
| ID | 4665471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3840649 |
|---|
| End bp | 3841281 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639824674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971809 |
|---|
| Protein GI | 120612131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.338589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.195106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG CTATTGGTTA TGTGGCTGAT TTATGGCATC GAGAGCCTCC CGCAGATGAG
CGGGCGATAG CTCGTGTTGA ATCGGAGCTA GATGTTGTTT TTCCCGTGGA TTATAGGGAA
TTTTTACTTT GGTCTAATGG AGGGCAGGCT CAAGTCGGAA GTGCATACTT TTCATTTTGG
CGTGTGTGGG ATATTGTTGA TAGAAATATC TCTGCATCTA TTAAAAAGTA TATGTCTCCC
CTTTTTGTCG GTATCGGGAC CAATGGTGGA GGGGAGTGCT ATGCCTTGGA TTATTCGGAT
GATATTTCTT CGCCGAATTT TGTCATAGTT CCGCTAGGGG ATTTGGACCA TGCTAGTAAG
TTTGTTATTG CATCTTCGTT GGCTGGAGTT TTTGAAAAAT CTTTGAATGG GGATTTTAGC
GATGCTGATT ATAATGACAA TGAAATTGGG CCGTTAACGG AGGAAATGTT GAATATAAGG
AGGAAAAATA TTATGTATGA GGCTGAAAAT TATTGGCAGA AAAAAGAATA TTCAAAATTC
ATAGCATTGC TGAGCAAATC GGAGCTTGAT TTGACCGATT TGATGCGTAA AAAAATAGAT
ATGGCGAAAA AGAAGATCAA ACAGAATAAC TAA
|
|---|
| Protein sequence | MNKAIGYVAD LWHREPPADE RAIARVESEL DVVFPVDYRE FLLWSNGGQA QVGSAYFSFW
RVWDIVDRNI SASIKKYMSP LFVGIGTNGG GECYALDYSD DISSPNFVIV PLGDLDHASK
FVIASSLAGV FEKSLNGDFS DADYNDNEIG PLTEEMLNIR RKNIMYEAEN YWQKKEYSKF
IALLSKSELD LTDLMRKKID MAKKKIKQNN
|
|---|
| |