| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3466 |
|---|
| Symbol | |
|---|
| ID | 4666523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3830172 |
|---|
| End bp | 3830801 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639824662 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971797 |
|---|
| Protein GI | 120612119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.421094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGA AAAGGCAAAC GCAAAGGCAC ACCTACCGCC TCTCCGAGGG CCACGGGCTC
GCGCACGATC CGATTCCGGC GATCCTGGGG CCCCGGCCCA TCGGGTGGAT CTCCACGCGC
TCGGCCGGCG GCCGGGCCAA CCTCGCGCCC TACAGCTTTT TCAACATCTT CAACTACCGC
CCGCCCATCG TGGCGTTCTC CAGCGTCGGG CACAAGGACA CGGTGCGCAA TGCAGAGGAG
ACGGGCGAGT TCGTGTGCAA CCTGGCCACG CGCCCGCTGG CGGAACAGGT GAACCTGAGC
AGCACCGAGT TGCCTGGCGC CGACGAGTTC GCGCTCACCG GCCTCACGCC AGCGCCCTGC
CTGGAAGTGG CGGCCCCGCA CGTGGCGGAG AGCCCGGTGG CCCTGGAATG CCGGGTGACG
CAGGTCCAGC GCCTGGCCGG GCTGGACGGC GAGCCGCTCG GCACCTGGAT GGTGTTCGGC
CAGGTGGTGG CGGTGCAGAT CGACCGCGCG CTGCTGCACG GCGGCATCTA CGACACGGCT
GCGGCGCAGC CCATCCTGCG CGCGGGCGGT CCGCAGGACT ATTTCCAGAT CCTGCCCGAG
GGACTGCTGC GCATGGCGCG GCCCCGGTAG
|
|---|
| Protein sequence | MHTKRQTQRH TYRLSEGHGL AHDPIPAILG PRPIGWISTR SAGGRANLAP YSFFNIFNYR
PPIVAFSSVG HKDTVRNAEE TGEFVCNLAT RPLAEQVNLS STELPGADEF ALTGLTPAPC
LEVAAPHVAE SPVALECRVT QVQRLAGLDG EPLGTWMVFG QVVAVQIDRA LLHGGIYDTA
AAQPILRAGG PQDYFQILPE GLLRMARPR
|
|---|
| |