| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3452 |
|---|
| Symbol | |
|---|
| ID | 4669543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3814654 |
|---|
| End bp | 3815778 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639824648 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971783 |
|---|
| Protein GI | 120612105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.448571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.315127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT TCATCATCTC GTCCATGGTT TCCCGCCTCA CCCCGACCAG CGCTCCGCCA
ACGCACCAAG CCCATGGCGC GCCTGCCGCG CCCCCGCCGC ATGCGCGAGG CGCATCCTCC
GCAGTGGCGG CCGGTGCCGG CGCAGCCCTG CGTCCCCGAG GGGTGCCCCC AGGACCTTCC
GCGCCGCGCC GCGGCGTGGC CGGCGACGCG CTGTTGCGGC CCTATGTCAT GGCGCGGGCG
ATCGATGGAC GGCACGTGGA AGGGGCGGAT CTGGCCCGAC TGCGGCAGGC CCACGGCACG
GTCGAGGCAA CGCGCAGCCT CCTGTCCATT GGGCGGGGCA ATGTGGCTCA GGACATCGAG
CGCACCGGCG GCGAGAGCCT GCGCGGGATG ACCGCCGCCA AGGCCGTGGC GGAACACCTG
GTGGGTGCGG GCTGGCCGCA GTTGGCCGCG AGGGCCGCCG GTGCGATCGC GGCCAGGGCC
GGCAACTGCG ACGAGCACGC GGCCCTCGCA GCCCTGTTGC ACGTGCCCCG GCTGCGCCCG
CAAGAGGCGC TCTGCCAGGT GATTTCCCAC GAGATCCCGC ACGTATGGAC CGAAGTGCGC
GGCGGTGGAG GGCCGGAGGA CGACCTCGTC ATGGATGCCT GGCTGGAAGG GCCCGCAGTG
TTCGCTCCCG ATGGGCAGTG GTCCGACACG CCGGCGACCA AGGAGGAATA CTTTGTGCAG
GGCGGTCCGG AAAAAGCCTG CCTCGACGTG TTGCTCGCAT ACTCCGGCGC CGCCTTGCAT
GCATGGGTCG AGTACGAACG GAGCCAGGTT CCGGAAGGCT CCCTGCCTCC CCCCGGCTAT
GCCTATCCAG CCATGCCGGC CGTCAGCAGG GCCTTCGAGC GCAGGGTCCA GCGGAAACTC
TCCGGTGCCG GAGAGGCGGA GCGGGCCGCC AGTGCCGGGG TGCCCCGCGA GGCACTGACG
GCGCTACCCG CGATGCAGGA GGCACGGCGC GCGGTGCGCT ATGGTGTGCT GGCCGTAGGC
GTGGCCCGGC AGATGACCGC CGGGCTGGAC GTGCGCCAGG CCGTGGCAGA AGTGCCCGCC
TTGCTGTACG GCGCCGCCTG CCGGCTCCGC CGGAGAACGT CCTGA
|
|---|
| Protein sequence | MATFIISSMV SRLTPTSAPP THQAHGAPAA PPPHARGASS AVAAGAGAAL RPRGVPPGPS
APRRGVAGDA LLRPYVMARA IDGRHVEGAD LARLRQAHGT VEATRSLLSI GRGNVAQDIE
RTGGESLRGM TAAKAVAEHL VGAGWPQLAA RAAGAIAARA GNCDEHAALA ALLHVPRLRP
QEALCQVISH EIPHVWTEVR GGGGPEDDLV MDAWLEGPAV FAPDGQWSDT PATKEEYFVQ
GGPEKACLDV LLAYSGAALH AWVEYERSQV PEGSLPPPGY AYPAMPAVSR AFERRVQRKL
SGAGEAERAA SAGVPREALT ALPAMQEARR AVRYGVLAVG VARQMTAGLD VRQAVAEVPA
LLYGAACRLR RRTS
|
|---|
| |