Gene Aave_3451 details

Gene Information

• Locus tag: Aave_3451
• Symbol: lspA
• ID: 4667474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax citrulli AAC00-1
• Kingdom: Bacteria
• Replicon accession: NC_008752
• Strand: +
• Start bp: 3814104
• End bp: 3814613
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639824647
• Product: lipoprotein signal peptidase
• Protein accession: YP_971782
• Protein GI: 120612104
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.10093
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.187541
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCGCG GCAACGCTTC TTCCTCCGCA TCCGGCAAGG GCTCGCTGTG GCCCTGGCTG 
GCCTGGGCCG TGCTGCTGCT GGTGGCCGAC CAGTTCACCA AGACGCTGAT CCTGGGCTAC 
TACCGCCTGG GCGACGCCAC CTACGTCACC AGCTTCTTCA ACATCGTGCG GGCGCACAAC 
ACCGGCGCGG CGTTCTCGTT CCTGGCCAAC GCGGGCGGCT GGCAGCGCTG GGTGTTCACC 
GGCATCGGCG TGGCGGCGGC GTTCTTCATC GTCTGGCAGC TGCGCGCCCA CCCCGGGCAG 
AAGCTGTTCT GCTTCGCGCT CTCCAGCATC CTGGGCGGCG CCATCGGCAA CGTGGTGGAC 
CGCATGATGC ACGGCTACGT GGTGGACTTC CTGGACTTCC ACGCACGCGG CTGGCACTTC 
CCGGCCTTCA ACCTGGCCGA CTCCGCGATC ACGATCGGCG CGGCCTGCCT GATCATCGAC 
GAGCTGATGC GGGTGCGGCG GGGCAGCTGA 

 

Protein sequence

MARGNASSSA SGKGSLWPWL AWAVLLLVAD QFTKTLILGY YRLGDATYVT SFFNIVRAHN 
TGAAFSFLAN AGGWQRWVFT GIGVAAAFFI VWQLRAHPGQ KLFCFALSSI LGGAIGNVVD 
RMMHGYVVDF LDFHARGWHF PAFNLADSAI TIGAACLIID ELMRVRRGS