| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3447 |
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| Symbol | |
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| ID | 4668288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3808084 |
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| End bp | 3809133 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824643 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_971778 |
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| Protein GI | 120612100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.890437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0946211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACG CTGCCGTTAC CGCTCCCGCC GTTTCCTCGC CTTCCCTCCC GCTGCCCGCC
CACCGCACCC TGCGCCGCCA GGGCCTGGCC GCGGCGCTGG CCGCCATCGC CTGCCTGGCC
ACGGGCACGG TCCACGCCCA GCAGGCCAAG GAAGTCAAGC TCGGCTACGC GCTGGCCGTC
AACTCGCACT ACGGTGCGGC CGCCCAGGCG TGGTCCGAAA CGGTCGAGAA GGCCACCAAC
GGCGCCATCA AGTTCAAGCA GTTCCCCTCC AGCGCCCTGG GCGGCGAGCG CGAGCTGATC
GAGGGCCTGC AACTGGGCAC CGTGGAGGCC GTCATCGTCT CCACCGGGGC CCTGAGCAAC
TTCGTGCCCG ACGTGGGCGT GGTGGACATC CCCTTCCTGT TCCGCGACAC GGCCCACGCC
CGCGCCGTGC TCGACGGCGC CTTCGGCCAG GAACTGCTGG GCAAGTTCCA GAAGCGTGGC
CTCATCGCGC TGGCCTGGGG CGAGCAGGGC TTCCGCCACC TCACCAACAA CAAGCATCCG
GTCAAGACGC CCGCCGACCT GAAAGGCCTG AAGATCCGCG TGACCGAGAA CCCGGTCCAC
ATCACCGCCT TCCGCACGCT GGGCGCCTCG CCCACGCCCA TGTCCTGGCC CGAGGTGATC
GGCGCGCTGC AGCAGGGCAC CATCGACGGG CAGGAGAACC CCATGTCGGT CATCGTCTCG
GCCAAGCTGC CGCAGGTGCA GAAATACCTC TCGCTCACGG GCCACGTCTA TGCCCCGATG
GCCCTCATCG TTTCGCCCAA CTTCTGGGCG GGCCTGAACG ATGCGCAGAA GGCCGCCTTC
ACGCAAGGCG CCAAGGCGGG CGCGCTGGCT TCGCGCAAGT TCGTCGATGA CGTGGAGCAG
AAGGGCCTGG CCGAAGTCAA GGCCGCCGGC ATGCAGGTGG TGGAGTCGGT GGACAAGAGC
GCCTTCCAGA AGGCCCTGGA GCCCGCCTAC AAGCAGTACG CCACCAAGTT CGGCCAGAAG
ACCCTGGACC AGATCGCCAG CGTGAAGTGA
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| Protein sequence | MRHAAVTAPA VSSPSLPLPA HRTLRRQGLA AALAAIACLA TGTVHAQQAK EVKLGYALAV
NSHYGAAAQA WSETVEKATN GAIKFKQFPS SALGGERELI EGLQLGTVEA VIVSTGALSN
FVPDVGVVDI PFLFRDTAHA RAVLDGAFGQ ELLGKFQKRG LIALAWGEQG FRHLTNNKHP
VKTPADLKGL KIRVTENPVH ITAFRTLGAS PTPMSWPEVI GALQQGTIDG QENPMSVIVS
AKLPQVQKYL SLTGHVYAPM ALIVSPNFWA GLNDAQKAAF TQGAKAGALA SRKFVDDVEQ
KGLAEVKAAG MQVVESVDKS AFQKALEPAY KQYATKFGQK TLDQIASVK
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