| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3445 |
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| Symbol | |
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| ID | 4668093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3806160 |
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| End bp | 3807443 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824641 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_971776 |
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| Protein GI | 120612098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0983264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA CCCTCTTCGT TTCCGCCCTC CTGCTGATGG CGCTGGGCTT TCCCGTCGCG
TTCGCGCTCG CCATGTCGGC CGCCATCGCG GTCTTCGTGG GCGGGCGCTA TCCGCAACTG
ATCGTGTTCA AGGAGATGTT CACGGGCATC GACAGCTTCC CGCTGATGGC CGTGCCCTTC
TTCATCCTCG CGGCCGAGAT CATGTCCGGC GGCGCGCTCA CCGTGGTGCT GCTGCGCTTC
GCCGCGCAGT TCGTGGGCCA CCTGCGCGGG GGCCTGGGGC ACGCCAACAT CCTGTCGCTC
ACGCTGTTCT CGGGCATCTC GGGCTCGGCC CTGGCCGACG CGGCGGGGCC CGGCTCGATG
ATGGTCAAGA TGATGGACAA GGCGGGCTAC TCGCGCGCCT ACGCCGCCGC GCTCACCGCC
AGCACGGCCA TCGTGGGGCC CATCATCCCG CCCTCGATCA TCATGATCAT CTACGCGCTG
CAGGACGAGC AGGTCTCGGT CGGCGCGCTC TTCATCGCCG GCTTCGCGCC GGGCATCCTC
ATCGCCGTGG CCATGGCCAT CGTCAACTGG CGCGTGTGCG TGCAGCGCGA CTACCGCTCC
CGCGAGCCGC GCCCGGGCGG CCGGGAAATG CTCGCCAACA GCATCCGCGC CATTCCGGCC
CTGATGCTGG TGGTGCTGAT CCTGGTGGGC ATCCGCTTCG GCATCTTCAC GCCCACCGAG
GCCTCCGTGG TGGCCGTGTT CTACGCCCTG GTCTGCGGCA AGTGGATCTA CCGCACGCTG
GAGTGGAAGG CCCTGCCGCA CATCGCCGCA CGCTCCGCGC TGCTCACCGC CTCGGTGCTG
CTGGTGGTGG CGGCCTCGGC CGCCTTCGCC TGGGTGCTGA CGGTGGAAGG GGTGCCCCAG
CGCCTGGCCG AGACGATCGT GGGCTGGAAC CTCTCGCCCG TCACCTTCCT CATCGCGGTC
AACATCCTGC TGCTGCTCTT CGGCATCTTC ATGGAGCCGC TGCCGGGCGT GATGATCCTC
GTGCCCATCC TCGCGCCCAT CTCGGCGGCG CTGGGCATCG ACCCGATCCA CTTCGCCATG
GTGGTGATCG TCAACCTCAC CCTGGGCATG ATCACGCCGC CGGTGGGCGG ACTGCTGTTC
GTCACCTCGG TCGCCACCAA GGTGCCGCTG GCGGCGCTCA CGCGCGAACT GCCGCCGTTC
CTCGTGGCGC ACCTGATCGT GCTGGGCCTG CTCACCTTCG TGCCCGCCAT CTCCACCTGG
CTGCCGCACG CACTGGGCTT CTGA
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| Protein sequence | MAITLFVSAL LLMALGFPVA FALAMSAAIA VFVGGRYPQL IVFKEMFTGI DSFPLMAVPF
FILAAEIMSG GALTVVLLRF AAQFVGHLRG GLGHANILSL TLFSGISGSA LADAAGPGSM
MVKMMDKAGY SRAYAAALTA STAIVGPIIP PSIIMIIYAL QDEQVSVGAL FIAGFAPGIL
IAVAMAIVNW RVCVQRDYRS REPRPGGREM LANSIRAIPA LMLVVLILVG IRFGIFTPTE
ASVVAVFYAL VCGKWIYRTL EWKALPHIAA RSALLTASVL LVVAASAAFA WVLTVEGVPQ
RLAETIVGWN LSPVTFLIAV NILLLLFGIF MEPLPGVMIL VPILAPISAA LGIDPIHFAM
VVIVNLTLGM ITPPVGGLLF VTSVATKVPL AALTRELPPF LVAHLIVLGL LTFVPAISTW
LPHALGF
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