| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3428 |
|---|
| Symbol | rpmB |
|---|
| ID | 4669501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3787473 |
|---|
| End bp | 3787706 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639824624 |
|---|
| Product | 50S ribosomal protein L28 |
|---|
| Protein accession | YP_971759 |
|---|
| Protein GI | 120612081 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0227] Ribosomal protein L28 |
|---|
| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0550772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.711167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG TCTGCGACGT CACGGGCAAG AAGCCCATGG TCGGGAACAA CGTTTCCCAC
GCCAACAACA AAACCAAGCG CCGGTTCCTG CCGAACCTGC AATACCGCCG TTTCTGGGTC
GAGAGCGAAA ACCGCTGGGT GCGCCTGCGT GTTTCCAGCG CCGCCCTGCG TCTGATCGAC
AAGAACGGCA TCGATTCCGT GCTCGCCGAC CTGCGTGCAC GTGGCCAGGC TTAA
|
|---|
| Protein sequence | MARVCDVTGK KPMVGNNVSH ANNKTKRRFL PNLQYRRFWV ESENRWVRLR VSSAALRLID
KNGIDSVLAD LRARGQA
|
|---|
| |