| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3421 |
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| Symbol | |
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| ID | 4668938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3777282 |
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| End bp | 3779648 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824617 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_971752 |
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| Protein GI | 120612074 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.507063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA TCATCCGGCA ACTGGCCACG GAAATCAGGG TGGGGGAACA GCAGGTCCGT
GCGGCCGTGG ATCTGCTGGA CGGCGGGGCC ACGGTGCCCT TCATCGCGCG CTACCGCAAG
GAGGCCACGG GCGGCCTGGA CGACGTTCAA CTGCGCGAAC TGGAGGCGCG GCTCGCCTAC
CTGCGCGAGC TGGAGGACCG CCGCGCCGCG GTGCTCAAGG CCATCGACGA GCAGGGCAAG
CTGACCGATG CGCTGCGGGC CGCCATCGCC GCCGCGCCCA CCAAGCAGGA GCTGGAAGAC
ATCTACCTTC CCTACAAGCA GAAGCGCCGG ACCAAGGGGC AGATCGCGAA GGAGTTCGGC
ATCGAGCCGC TGGCCGACCG CCTGTTCGCG GACCCGACGC TCGACCCGGC CGTGGAGGCG
CAGGCCTTCC TGCGCCCGCC CGAAGTGCTG GACGACGGCA AGCCGGGCGC CGATTTCTCC
ACCGTGGGTG CGGTGCTGGA CGGCGTGCGC GACATCCTTT CCGAGCGCTG GGCCGAAGAT
GCCGCCCTGG TGCAATCGAT GCGGGAATGG CTCTGGACCG AAGGCCTGCT GCGCAGCAAG
AAAGTGGAGT CGAAGAACGA GGCCGACCCG GAGGTGGCGA AGTTCCGCGA CTATTTCGAC
TACGACGAAC CCATCGGCCG CGTGCCGTCG CACCGCGCGC TGGCCGTGTT CCGCGGGCGG
GCGCTGGAGA TCCTGGAGGC CAAGCTCGTG CTGCCCGTGG AACCCGAGCC CGGCAAGCCG
AGCATTGCCG AGGGCCGCAT CGCGCTGCAC CTGGGCTGGA GCCACGCGGG CCGGCCGGCC
GACGACCTGA TCCGCAAGTG CGTGGCCTGG ACCTGGCGCG TGAAGCTCAG CCTGTCCACG
GAGCGCGACC TGTTCTCACG CCTGCGCGAG GAGGCCGAGA AGGTGGCGAT CAAGGTCTTC
TCTGACAACC TGCGCGACCT GCTGCTGGCC GCGCCCGCGG GCCCGCGGGC GGTGATGGGC
CTGGACCCGG GCATCCGCAC CGGCGTGAAG GTGGCGGTGG TGGATGCCAC CGGCAAGCTG
GTGGAGACGG CCACGGTCTA TCCGCACGAG CCACGCCGCG ACTGGGAGGG CTCTCTGCAC
ACGCTGGCGC GCCTCGTGCA GAAACACGGC GTGCAACTGG TGGCCATCGG CAACGGCACC
GCGAGCCGCG AGACCGACAA GCTGGCGGCG GACCTGCTCA AGCTGGTGGC CAAGGCCGAC
CTCGGTTTCG AGAAGGTGGT GGTGAGCGAG GCGGGTGCCT CCGTCTATTC CGCCAGCGAG
TACGCCAGCC AGGAAATGCC GGACGTGGAC GTGAGCCTGC GCGGCGCGGC GAGCATCGCC
CGCCGGCTGC AGGACCCGCT GGCCGAGCTG GTGAAAATCG ACCCGAAGAG CATCGGCGTG
GGCCAGTACC AGCACGACGT GAACCAGAGC GAACTGGCGC GCACGCTGGA CGCGGTCGTC
GAGGATTGCG TGAACTCCGT GGGTGTGGAC CTGAACACCG CGAGCGCGCC GCTGCTCTCG
CGCGTATCGG GCCTGTCGGG CAGCGTGGCC AAGGCCGTGG TGCGCTGGCG CGAGGCCAAC
GGCGCCTTCC GCAGCCGGCG CCAGCTCATG GAAGTGGCGG GCCTGGGCGC GAAGACGTTC
GAGCAGTCTG CCGGCTTTTT GCGCATCCGC GGCGGCGACA ACCCGCTGGA CATGACGGGC
GTCCACCCGG AGACCTATCC GGTGGTGGAG CGCATCCTCG CGCACACGGC CAAGCCGGTG
AACGAAATCA TGGGCCGCGC CGACATGCTC AAGCAGCTCA AGCCCGAGCT GTTCGCCAAC
GAGAAGTTCG GCGTGATCAC GGTCCGGGAC ATCCTCGCCG AACTCGAAAA GCCCGGCCGC
GACCCGCGCC CGGACTTCAA GGTGGCGCGC TTCAACGACG GCGTGGAGGA CATCGCCGAC
CTGAAGGAGG GCATGGTGCT CGAGGGCACC GTGAGCAACG TCGCGCAGTT CGGCGCTTTC
GTGGACCTGG GCGTGCACCA GGACGGCCTG GTCCACGTGA GCCAGCTCAG CCACAAGTTC
GTGCAGGACG CGCGCGAGAT CGTGAAGACC GGCGACATCG TGAAGGTGAA GGTGCTCGAG
GTGGACCCGG TGCGCAAGCG CATCAGCCTG ACCATGAAGC TCGATGCCGC ACCGGCGCGC
CGCGACCAGG ATGGCCGCGG CCCGCGCGAG AACCGCTTCG AGGGCGCCGG CCGCGGCTAT
GCCCAGCCCG CGCGCCGCGC GGCCGACCCG GCTCCCCAGT CGGCCATGGC GTCGGCCTTC
GCGAAGCTGC AGAGTCACAA ACGGTAA
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| Protein sequence | MQQIIRQLAT EIRVGEQQVR AAVDLLDGGA TVPFIARYRK EATGGLDDVQ LRELEARLAY
LRELEDRRAA VLKAIDEQGK LTDALRAAIA AAPTKQELED IYLPYKQKRR TKGQIAKEFG
IEPLADRLFA DPTLDPAVEA QAFLRPPEVL DDGKPGADFS TVGAVLDGVR DILSERWAED
AALVQSMREW LWTEGLLRSK KVESKNEADP EVAKFRDYFD YDEPIGRVPS HRALAVFRGR
ALEILEAKLV LPVEPEPGKP SIAEGRIALH LGWSHAGRPA DDLIRKCVAW TWRVKLSLST
ERDLFSRLRE EAEKVAIKVF SDNLRDLLLA APAGPRAVMG LDPGIRTGVK VAVVDATGKL
VETATVYPHE PRRDWEGSLH TLARLVQKHG VQLVAIGNGT ASRETDKLAA DLLKLVAKAD
LGFEKVVVSE AGASVYSASE YASQEMPDVD VSLRGAASIA RRLQDPLAEL VKIDPKSIGV
GQYQHDVNQS ELARTLDAVV EDCVNSVGVD LNTASAPLLS RVSGLSGSVA KAVVRWREAN
GAFRSRRQLM EVAGLGAKTF EQSAGFLRIR GGDNPLDMTG VHPETYPVVE RILAHTAKPV
NEIMGRADML KQLKPELFAN EKFGVITVRD ILAELEKPGR DPRPDFKVAR FNDGVEDIAD
LKEGMVLEGT VSNVAQFGAF VDLGVHQDGL VHVSQLSHKF VQDAREIVKT GDIVKVKVLE
VDPVRKRISL TMKLDAAPAR RDQDGRGPRE NRFEGAGRGY AQPARRAADP APQSAMASAF
AKLQSHKR
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