Gene Aave_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3411 
Symbol 
ID4668462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3767255 
End bp3768256 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content73% 
IMG OID639824607 
ProductDNA-directed DNA polymerase 
Protein accessionYP_971742 
Protein GI120612064 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCGCCGTGTC TCCCTGGATC GCTGCCCAGC GCCGCAGGCT CCTGGCCCAG 
CGCGGCCATG CCTGGCTGCT CAGCGGCCCC TCCGGGCTGG GGCAGTACAC GCTCGCGCTC
GAACTGGTGC GTGCCTGGCT GTGCGAAGCG CCTGCCGAAG ACGGCGCATG CGGGCACTGC
GGCAGCTGCC ATGCCATCGA CGTGCGCACC CATGCCGACC TCTGCGTGCT CATGCCCGAG
ACGGAGATGA TCGAGCGCGG ATGGCCGCTG CCCGAGAAGG CGCAGGCCGA GATCGACGAC
AAGAAGCGCA AGGCCAGCCG CGAGATCCGC GTCGAGGCGA TGCGCGACGC GGTGCAGTTC
GCGCAGCGCA CTTCCGCGCG CGGACGGGGC AAGGCCGTGC TCGTCTATCC GGCCGAGCAG
ATGAACACCG TCACCGCCAA CGCCCTGCTC AAGACGCTGG AGGAGCCCGT GGGCGACGTG
CGCTTCGTGC TGGCGAGCGA GGCCGCGCAC CAGTTGCTGC CCACCATCCG CAGCCGCTGC
CTGGGCCACA CGATGCAGTG GCCCGGCGAG GAAGAGTCGC TGGCCTGGCT CGCGGGGCAG
GGCGTCGCGG CCGATGCCGC GGCATCCCTG CTGCGGGCGG CCGGAGGCCG GCCCGAGGAC
GCCCTGGCCT TCGCCCGGGG AGGGCGCAGC CCCCAGGCCT GGTCGCAGAT TCCGCGCGCC
GTGGCCCGCG GCGACGCAAC GGCGCTGTCG GACCTGTCGC CCGCCGACGC CGTGGACGCC
CTGCAGAAGC TCTGCCACGA CCTGCTCGCC CGGCGCGTGG GCGCCGCACC CCGCTACTTC
GCCGAGGCCG ACCTGCCTTC GCCGCCCGGC GTCGGCCCGC TCACCCGCTG GGCCCGCGCG
CTCGCGAAGG AGGCCCGCAC CGCGGACCAT CCCTTCAATC CGGGATTGAT GCTGGAGTCG
CTTGTTGCCC AGGCGCGAAA CGCCCTAAAC TCCCGCCATT GA
 
Protein sequence
MSAAAVSPWI AAQRRRLLAQ RGHAWLLSGP SGLGQYTLAL ELVRAWLCEA PAEDGACGHC 
GSCHAIDVRT HADLCVLMPE TEMIERGWPL PEKAQAEIDD KKRKASREIR VEAMRDAVQF
AQRTSARGRG KAVLVYPAEQ MNTVTANALL KTLEEPVGDV RFVLASEAAH QLLPTIRSRC
LGHTMQWPGE EESLAWLAGQ GVAADAAASL LRAAGGRPED ALAFARGGRS PQAWSQIPRA
VARGDATALS DLSPADAVDA LQKLCHDLLA RRVGAAPRYF AEADLPSPPG VGPLTRWARA
LAKEARTADH PFNPGLMLES LVAQARNALN SRH