Gene Aave_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3398 
Symbol 
ID4667624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3755352 
End bp3756098 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID639824594 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_971730 
Protein GI120612052 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.736844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.232626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCTGC AGGTCACGAG CTGCGGCGTC CACCCCACGC AGGGCCCCTG GTCCGGCACT 
GCCGCCCAGC CCACGCGCGC CGGCCAGTTC ACGGAGTGCC GCCAGCACTT CGCCGGCGGC
GTGCCGCCCC TCACCCCCGA TGCGCCCCGG CTGCGCGAGC TGTGCTTCGA CGCCTTCGCG
GTGCTCCACA GCGGCAACAC ACGCACCCCC GTGTATGTGG CCGAGCGGCT CAACCGCCAG
ATCCTGCAGC AGGCCCGGCA GCAGCACCGC ACCGACCATT TCTACGCGGA CGCGCGGCTG
CCGCGCGGCG AGCGCGCCGA ACTCGAGGAT TACCGCGGCT CGGGCTATGC CCGCGGCCAC
ATGGCGCCTG CGGGCGACAT GGGCACCCCC GAAGCCATGG CGCAGTCGTT CAGCCTCGCC
AACATGGTGC CGCAGGATCC GAAGCAGAAC AGCGGCCCCT GGGCACGCAT CGAGGAGGAC
ACGCGCCGCT ACGCGATGCG CGCGCGCGGC GACGTCTATG TCATCACCGG CCCCGTCTTC
GAGCCCGGGG CCAGGACCAT CGGCGCCGGA CAGGTGGCCG TGCCTTCGCA CCTGTTCAAG
CTGGTGTACG ACGCCGGGAC CGGGCATTCC TGGGCGCACT GGCAGCAGAA CGCGCCGGGC
GCCACCGCCG GCCCGCCGAT CACGCTGCAG GAAGTGGAGC GCCGCACCGG CATGCGGCTG
CTGCCCTCCC CGGTGCCCGC GCATTGA
 
Protein sequence
MGLQVTSCGV HPTQGPWSGT AAQPTRAGQF TECRQHFAGG VPPLTPDAPR LRELCFDAFA 
VLHSGNTRTP VYVAERLNRQ ILQQARQQHR TDHFYADARL PRGERAELED YRGSGYARGH
MAPAGDMGTP EAMAQSFSLA NMVPQDPKQN SGPWARIEED TRRYAMRARG DVYVITGPVF
EPGARTIGAG QVAVPSHLFK LVYDAGTGHS WAHWQQNAPG ATAGPPITLQ EVERRTGMRL
LPSPVPAH