Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3398 |
Symbol | |
ID | 4667624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3755352 |
End bp | 3756098 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639824594 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_971730 |
Protein GI | 120612052 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.736844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.232626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCTGC AGGTCACGAG CTGCGGCGTC CACCCCACGC AGGGCCCCTG GTCCGGCACT GCCGCCCAGC CCACGCGCGC CGGCCAGTTC ACGGAGTGCC GCCAGCACTT CGCCGGCGGC GTGCCGCCCC TCACCCCCGA TGCGCCCCGG CTGCGCGAGC TGTGCTTCGA CGCCTTCGCG GTGCTCCACA GCGGCAACAC ACGCACCCCC GTGTATGTGG CCGAGCGGCT CAACCGCCAG ATCCTGCAGC AGGCCCGGCA GCAGCACCGC ACCGACCATT TCTACGCGGA CGCGCGGCTG CCGCGCGGCG AGCGCGCCGA ACTCGAGGAT TACCGCGGCT CGGGCTATGC CCGCGGCCAC ATGGCGCCTG CGGGCGACAT GGGCACCCCC GAAGCCATGG CGCAGTCGTT CAGCCTCGCC AACATGGTGC CGCAGGATCC GAAGCAGAAC AGCGGCCCCT GGGCACGCAT CGAGGAGGAC ACGCGCCGCT ACGCGATGCG CGCGCGCGGC GACGTCTATG TCATCACCGG CCCCGTCTTC GAGCCCGGGG CCAGGACCAT CGGCGCCGGA CAGGTGGCCG TGCCTTCGCA CCTGTTCAAG CTGGTGTACG ACGCCGGGAC CGGGCATTCC TGGGCGCACT GGCAGCAGAA CGCGCCGGGC GCCACCGCCG GCCCGCCGAT CACGCTGCAG GAAGTGGAGC GCCGCACCGG CATGCGGCTG CTGCCCTCCC CGGTGCCCGC GCATTGA
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Protein sequence | MGLQVTSCGV HPTQGPWSGT AAQPTRAGQF TECRQHFAGG VPPLTPDAPR LRELCFDAFA VLHSGNTRTP VYVAERLNRQ ILQQARQQHR TDHFYADARL PRGERAELED YRGSGYARGH MAPAGDMGTP EAMAQSFSLA NMVPQDPKQN SGPWARIEED TRRYAMRARG DVYVITGPVF EPGARTIGAG QVAVPSHLFK LVYDAGTGHS WAHWQQNAPG ATAGPPITLQ EVERRTGMRL LPSPVPAH
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