Gene Aave_3385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3385 
Symbol 
ID4667882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand- 
Start bp3741861 
End bp3742469 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID639824581 
Producthypothetical protein 
Protein accessionYP_971717 
Protein GI120612039 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.214146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.256607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATTGC AGCAGATCGT CGAACAAACC GTCGCGGGCC TGGGTTACGA CCTGGTGGAG 
ATCGAGCGCT CCGCCGGCGG GCTGCTGCGC ATCACCATCG ATCTGCCCTG GCAGCCGCCC 
GTGGAAGGCG CCGCCTCCGA TGCCGCCGCT CCGGCCGGCC CCGAGGCATT CGTGACGGTC 
GAGGACTGCG AGAAGGTCAC GCGCCAGCTG CAGTTCGCGC TGGAGGTCGA TGGCGTGGAC 
TACAAGCGCC TCGAGGTCTC CTCGCCGGGC ATCGACCGCC CGCTGCGCCA TGAACAGGAT 
TTCCAGCGCT TCGCCGGCGA GGTGATCGAC ATCACGCTCA AGGCGCCCAT CGGCGATGCC 
GCCGCAGGCC AGGTCAACGC CAACCGCAAG AAATTCCGCG GCACGCTCGA GCGCGCCGAG 
ACCGGAGGCT GGCAGATCGT CTGGAGCGAC GAGCCTCCCC CGAAGCCTGG CCAGAAGGTC 
AGCAAGAAGC GGGTGCCCGC GCCGCTGCAG GCCCTGGGCT TCACGCTCGA CGAGCTGCGC 
GACGCCCGGC TGGCGCCGAT CGTGGATTTC AAGGGACGCG GGCCGAAAGG CGGGCCGGCC 
CCGGACTGA
 
Protein sequence
MALQQIVEQT VAGLGYDLVE IERSAGGLLR ITIDLPWQPP VEGAASDAAA PAGPEAFVTV 
EDCEKVTRQL QFALEVDGVD YKRLEVSSPG IDRPLRHEQD FQRFAGEVID ITLKAPIGDA 
AAGQVNANRK KFRGTLERAE TGGWQIVWSD EPPPKPGQKV SKKRVPAPLQ ALGFTLDELR 
DARLAPIVDF KGRGPKGGPA PD