| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3384 |
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| Symbol | |
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| ID | 4667828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3740295 |
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| End bp | 3741779 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824580 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_971716 |
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| Protein GI | 120612038 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0163394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.419703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGCG AACTGTTGAT GTTGGTTGAA GCCATTTCGC GCGAGAAGAA CGTGGAGCGC
GACGTGGTGT TCGGCGCCGT GGAGCTGGCA CTGGCCCAGG CCACCAAGAA GCTCTACCCG
GGCGAGGTGG ACATCCGCGT GGCGATCGAC CGCGACAGCG GCAACTACGA GACTTTCCGC
CGCTGGCTCG TCGTGCCCGA CGACGCCGGC CTGCAGAACC CGGACGCCGA GGAACTGCTG
ATGGACGCGC AGGAGCGCAT CGCCGACATC GAGGTCGGCG AGTACATCGA GGAAGGCATC
GAGTCCCTGC CCATCGGCCG CATCGGCGCC ATGGCCGCCA AGCAGGTCAT CCTGCAGAAG
ATCCGCGACG CCGAGCGCGA GATGCTGCTC AACGACTTCA TGTCGCGCGG CGAGAAGATC
TTCACCGGCA CGGTCAAGCG CATGGACAAG GGCGACATCA TCGTCGAGTC CGGCCGCGTC
GAAGGCCGCC TGCGCCGCAG CGAGATGATC CCCAAGGAAA ACCTGCGCAA CGGCGACCGC
GTGCGGGCGA TGATCATGGA GGTGGACCTC ACGCTGCGCG GCGCGCCCAT CATCCTCTCG
CGCTCCGCGC CCGAGTTCAT GATCGAGCTC TTCCGCAACG AGGTGCCCGA GATCGAACAG
GGCCTGCTGG AGATCAAGAG CTGCGCCCGC GACCCCGGCA GCCGCGCCAA GATCGCCGTG
CTGTCGCACG ACAAGCGCGT GGACCCCATC GGCACCTGCG TCGGCGTGCG CGGCACGCGC
GTCAACGCCG TGACCAACGA GCTGGCCGGC GAGCGCGTGG ACATCGTGCT GTGGTCCGAG
GACCCGGCGC AGTTCGTGAT CGGCGCGCTG GCGCCGGCCA ACGTGTCCTC CATCGTGGTC
GATGAGGAAA AGCACGCCAT GGACGTGGTG GTGGACGAGG AGAACCTCGC GATCGCCATC
GGCCGCGGCG GCCAGAACGT GCGCCTCGCT TCCGACCTGA CGGGCTGGAA GATCAACATC
ATGGATGCGG CCGAGTCCGC CCAGAAGCAG GCCAACGAGA CCGATGCGTC CCGCCGCCTG
TTCATGGAGA AGCTCGACGT GGACGAGGAA ATCGCCAACA TCCTCATCGA GGAAGGCTTC
TCCAGCCTCG AGGAAGTGGC CTACGTGCCG CTGCAGGAGA TGCTCGAGAT CGAGAGCTTC
GACGAGGACA CGGTGAACGA ACTGCGCGCC CGCGCCAAGG ATGCCCTCCT GACCATGGAG
ATCGCCCGCG AGGAAAGCGT GGAAGGCGTC TCGCAGAACC TGCGGGACCT GGACGGGATG
ACGTCCGAGC TCATCGGCAA GCTGGCCGAG GGCGGTGTCC ATACCCGTGA TGATCTGGCC
GACCTGGCCA TCGACGAACT GACCGCCCTG ACCGGCCAGT CTGAGGAAGA AGCCAAGGCC
TTGATCATGA AGGCGCGCGA ACACTGGTTC GCGGGGCAAG AGTAA
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| Protein sequence | MNRELLMLVE AISREKNVER DVVFGAVELA LAQATKKLYP GEVDIRVAID RDSGNYETFR
RWLVVPDDAG LQNPDAEELL MDAQERIADI EVGEYIEEGI ESLPIGRIGA MAAKQVILQK
IRDAEREMLL NDFMSRGEKI FTGTVKRMDK GDIIVESGRV EGRLRRSEMI PKENLRNGDR
VRAMIMEVDL TLRGAPIILS RSAPEFMIEL FRNEVPEIEQ GLLEIKSCAR DPGSRAKIAV
LSHDKRVDPI GTCVGVRGTR VNAVTNELAG ERVDIVLWSE DPAQFVIGAL APANVSSIVV
DEEKHAMDVV VDEENLAIAI GRGGQNVRLA SDLTGWKINI MDAAESAQKQ ANETDASRRL
FMEKLDVDEE IANILIEEGF SSLEEVAYVP LQEMLEIESF DEDTVNELRA RAKDALLTME
IAREESVEGV SQNLRDLDGM TSELIGKLAE GGVHTRDDLA DLAIDELTAL TGQSEEEAKA
LIMKAREHWF AGQE
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