Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3381 |
Symbol | truB |
ID | 4667768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3736001 |
End bp | 3736999 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639824577 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_971713 |
Protein GI | 120612035 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.092575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.759632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC GCGCTCCCCG CATCCGGGTG CAGCGGCGCC CGGTGCACGG AGTGCTTCTG CTCGACAAGC CCCTTGGCCT TTCCAGCAAC GATGCGTTGC AGAAGGCCAA GTGGCTGCTG CGCGCCGAAA AGGCCGGCCA CACCGGCACG CTCGATCCTC TGGCCTCTGG CGTGCTGCCG CTGTGCTTCG GCGCGGCCAC CAAGTTCAGC CAGCTGCAGC TCGATGCGCC CAAGACCTAC GAGGCCGTCG CCCGGCTCGG CGTGACCACG ACCACGGGCG ACGCGGAAGG CGACGTGGTG GAGCGCCGGG AGGTGGATGC CTCGCAGCTC GCCGCCGCGC GCCTGGCCGA GGTGCAGCGG CAGTTCACCG GCCCCATCCG GCAGTTGCCG CCGATGCACA GCGCCCTCAA GAAGGATGGC AAGGCGCTGT ACGAATACGC CCGCGCGGGC ATCGCCGTCG AGCGCGAGGC GCGCGACGTG GTGATCCATG CGCTGGAACT GTCGCTGGCA GCGGACCAGG GCGGCGAGCC TGCCGTGCGC ATGGTCGTGA CCTGCAGCAA GGGCACCTAC ATCCGCACGC TGGGCGAGGA CGTGGGCGCC GCACTGGGTT GCGGCGCGCA CCTCGTCTTC CTGCGCCGTA TCGACACCGG CGGGCTGGGC GTGGAGCGCT GCATCACGCT CGCCGCGCTC GAAGCGCTGG ACGAGGCCGG GCGCATGGCC TGCGTGCAGC CGGTGGAAAC GCTACTCGCG GGGCATGCAT CTGTCACGCT GGACCATGAC AATACGGCGC GATTCCTCTC CGGCATGCGC CGCCGCGGCC CCTGGCCCGA CGCGCCCGCC GTGGCGGTGT TCGGCCAGCA TCCCCGCGCC CTGCTGGGCG TCGGCCGGGT GGCGGCCGGC GAACTCATCC CCGAGCGCCT CCTGAGCCCC CAGGAGATCG CACAGATTCT GGAAAGCACG CCGCGGGCAG AGCGCGGCAC ATTGGAACCC ACTCTATGA
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Protein sequence | MTARAPRIRV QRRPVHGVLL LDKPLGLSSN DALQKAKWLL RAEKAGHTGT LDPLASGVLP LCFGAATKFS QLQLDAPKTY EAVARLGVTT TTGDAEGDVV ERREVDASQL AAARLAEVQR QFTGPIRQLP PMHSALKKDG KALYEYARAG IAVEREARDV VIHALELSLA ADQGGEPAVR MVVTCSKGTY IRTLGEDVGA ALGCGAHLVF LRRIDTGGLG VERCITLAAL EALDEAGRMA CVQPVETLLA GHASVTLDHD NTARFLSGMR RRGPWPDAPA VAVFGQHPRA LLGVGRVAAG ELIPERLLSP QEIAQILEST PRAERGTLEP TL
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