Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3362 |
Symbol | |
ID | 4665955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3718957 |
End bp | 3719310 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639824558 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_971694 |
Protein GI | 120612016 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.253587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCT CTTCGCTTCC CGCCTCGGAC AGACTTTCAT CCTTGCCCCA TCCGTGCGTG CCCGGCTACG ACAACGTCCC CCAGTTCCCG GTGAAGGCGC CCTTGCCTTT CCGCCGTACC ATTCGCCGTC ACGAGCTGCA CCAAATCGTG CCCCTGGCCG AGACGACGAT CTACGAAATG GAACAGCGCG GCGAATTCCC ACGCCGCTTC CGCCTCACCG CCCGTTGCGT CGTCTGGGAC CTGGAAGAAG TCGAAGCCTG GATCGAAGAC CGCAAGCAAG CCTCTCGATC AGCGAAGACC AACTCGTCCA GCGGACCGGA CGTGAGGCTG CGCCGGCACC GCCCTGTTCG ATGA
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Protein sequence | MPPSSLPASD RLSSLPHPCV PGYDNVPQFP VKAPLPFRRT IRRHELHQIV PLAETTIYEM EQRGEFPRRF RLTARCVVWD LEEVEAWIED RKQASRSAKT NSSSGPDVRL RRHRPVR
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