Gene Aave_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3346 
Symbol 
ID4666120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3699834 
End bp3700331 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID639824542 
Producthypothetical protein 
Protein accessionYP_971678 
Protein GI120612000 
COG category[S] Function unknown 
COG ID[COG5435] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.891873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCGG AACGACCCAT GCAGTACCAC ATCCAGGAAG CCACCTTCGA CCTGCCCGAG 
GGCAGCTTCA TCGACCGCAG CGTGAACGTG CTGGTCTTCG GCGATCCCGC GCTGCCTTTC
AGCGTGGTTA TCACGCGAGA CTACTTCGAC GAGGGTGGAA GCGTCGAACA ACTGCTGCGC
GAGCAGGTCA AGGCGTTGTC CACGTCGGGC AAGCAGTTCA AGGAGCTGGA GTTCGGCACG
ACCCACCTGC CTTTGAATGC GCCAGCGGGT ACGCAGCCAA CATCGGCATC TGCATCCGCC
GCTGGTGGAG CGCCCAATGC TGCGGGCGCC TACGTTACTT ACACGAAGCA GGGCCATCCG
ATCCACCAGA AGATCGTGCT CGCGGAGATG CCCGGGCGTC GCGCACTGGT CGTGACCGGC
ACTTACGCCG GTCCCTGGAA GGAGGAGCAC GTCGCCCACT GGGCCTCGGT CCTGCACACG
CTGCGCCTGC GCGCGTGA
 
Protein sequence
MAAERPMQYH IQEATFDLPE GSFIDRSVNV LVFGDPALPF SVVITRDYFD EGGSVEQLLR 
EQVKALSTSG KQFKELEFGT THLPLNAPAG TQPTSASASA AGGAPNAAGA YVTYTKQGHP
IHQKIVLAEM PGRRALVVTG TYAGPWKEEH VAHWASVLHT LRLRA