Gene Aave_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3343 
Symbol 
ID4665451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3693214 
End bp3694368 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID639824539 
ProductRHS protein 
Protein accessionYP_971675 
Protein GI120611997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGC CTGCGGCTGC TGCAGGAGAG CCGCGGCGCG CAGACCAGCA CCTATGTGTA 
CGAACCGGCC AGCTACCGGC CGCTGGCGCG CATCGATGGT GCCGGTCCAT TGGAGCCGGA
GCATCCGGTC GCGGTGCTGG CGCTGGGAGG GAGGACCCGC GAGGTGATCC GGCCACGGGC
AAGGTCCGTT CCGTCCCGCT CACCAATGGG GACGCGAGCG ATGCGCACCA TGCGGTGGCG
GGGCCGGTGG GGGCGACGGC GCGCTGGTTG GCTGCACTCG GAGCGCGGGA GACATCGGCG
CAGGGCGCGA AGCCTGAACC GCCGGACAGA GAGCCGCCTC CGGCCAACGA CTCGTCGCAG
CCTTCGGCCC GCATCTACTA TTTCCATCTG CAGCCCAACG GCCTGCCCGA GGAAATGAGT
GACCGCGACG GTCACTTGGC GTGGCGGGCG CAGTACCGGG TGTGGGGCAG CGCGGTGGCG
GAGGAATGGC AGGCGTTCGA TGGTGTGGGG CGGCCGGTGG AGGCACCGAG GCACGAAACG
GGCCAGCGAC CGGACAACAG CGCCGCGCCG ATGCCTCAGA ACCTGCGTAT GCAGGGGCAG
TACCTGGACC GGGAGACGGG GCTGCACTAC AACACGTTCC GGTACTACGG CCCGGACGTG
GGGGCGTTCA CGACGCCGGA CCCGATCGGG CTGGCGGGTG GGGTGAATCT GCACCAATAT
GCGCCGAATC CGGTTTCTTG GATTGATCCG CTTGGATGGA ATCCTGTATG CCGGATGAGC
CAAACACCTC ACGAAACTGC CAGCAGTCTT CCCTTGGTGC GCCCTGGTAC ATCTGCTTGG
CAAAAGGCTG TCGAAGCTAT TCGGCAAGGA GGTAAAGGGG ATATACGAGT TAGCACGGCA
GCAGAAGCCA AGGCATTACT TCAAGAGGCT CGCGGGGGTA TGGATCGCAG AAAAATGTAC
TCCGATGATG GAGACTATTC AAAGGGATAT CAGGTGCATA AACCGCAGCC GGGCACCAAT
CGAAGTGGAG ATCGTTTATC TGCCAAAGAA AGATGGCAGC GCGGGGAGAC AGATGTAGGC
AACGATCTTC CACACATCAA ATGGAAAGAC CAGAGCGGGC GCGACCAAGG GCATATATTT
TCGAGGACTA AATGA
 
Protein sequence
MGRPAAAAGE PRRADQHLCV RTGQLPAAGA HRWCRSIGAG ASGRGAGAGR EDPRGDPATG 
KVRSVPLTNG DASDAHHAVA GPVGATARWL AALGARETSA QGAKPEPPDR EPPPANDSSQ
PSARIYYFHL QPNGLPEEMS DRDGHLAWRA QYRVWGSAVA EEWQAFDGVG RPVEAPRHET
GQRPDNSAAP MPQNLRMQGQ YLDRETGLHY NTFRYYGPDV GAFTTPDPIG LAGGVNLHQY
APNPVSWIDP LGWNPVCRMS QTPHETASSL PLVRPGTSAW QKAVEAIRQG GKGDIRVSTA
AEAKALLQEA RGGMDRRKMY SDDGDYSKGY QVHKPQPGTN RSGDRLSAKE RWQRGETDVG
NDLPHIKWKD QSGRDQGHIF SRTK