Gene Aave_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3340 
Symbol 
ID4669416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3690002 
End bp3690610 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content53% 
IMG OID639824536 
Producthypothetical protein 
Protein accessionYP_971672 
Protein GI120611994 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.794435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACG CGACAACTAC CTTGACATGC TCCGGCACGA AACGAGCCAG CGACCGTGCC 
TATGCCGCAG AACCTGCGCT TGCAGGGGCA GTCCTGGACC GGAAGACCGG GCTGCACTAC
AACACCTTTC GGTACTATGA CGCGGATCTG GGAGCGTTCA CTACGCCGGA TCCTATCGGG
TTGGCGGGAG GAGTAAATCT CCATGAGTAC GCGCCAAATC CGTTGTCTTG GATTGACCCG
TTGGGATGGT GTAAAGGGCT GAGTGGCGGC AACTGGAAGT TCAATCCAGT CAAAGACGTC
GACATGAGAG GTGGAGCGTC GTATCGCAGC GCTCTTGATG AAGCATTCCG AAGAACCGGT
GTTCCAAAAG AACAGTTTAC GGTAACGAAA TGGGGTAAAA CAATCGACGG CAAAAGCATT
CCGGTTGAAT ACACCGGACC AGGAGGCGCC AATGTTAATA TGGATATCCC GTCTCTTGAT
AACGTTAAGT CAAATGGTGG TTTGGGAGAG GGGCCTCATC AACCCCATAT TGGTTACCAA
ACTCCTGGGA AAGGGTCGAG TAGAACTCGA GGGCATATTT TTGTGGATAA CGTTCCTGCA
ACGAGGTAA
 
Protein sequence
MIDATTTLTC SGTKRASDRA YAAEPALAGA VLDRKTGLHY NTFRYYDADL GAFTTPDPIG 
LAGGVNLHEY APNPLSWIDP LGWCKGLSGG NWKFNPVKDV DMRGGASYRS ALDEAFRRTG
VPKEQFTVTK WGKTIDGKSI PVEYTGPGGA NVNMDIPSLD NVKSNGGLGE GPHQPHIGYQ
TPGKGSSRTR GHIFVDNVPA TR