Gene Aave_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3321 
Symbol 
ID4667437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3670033 
End bp3673782 
Gene Length3750 bp 
Protein Length1249 aa 
Translation table11 
GC content73% 
IMG OID639824519 
ProductL-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_971655 
Protein GI120611977 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.170675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.962202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CGCACCCCTC CCTGCATACC CGGCCTTTCT CGGCCTTCGC GCCGCGGCCC 
GCGACTGCGG CCGCGCCGCT GCGCGACGCG ATCACCGCGG CCTGCCGCAT TCCCGAGCCG
GAGGCCGTCG CGCCCTTGCT GGAAGAAGCG CGCATCGACG GTGCCGCGGC CCGGCGCGTG
CATGCCCTGG CACTGCGGCT GGCCGGAGGC CTGCGCGAGC GCAAGGGCGC GGGCGGCCGG
GCCGGCTGGG TGCAGGGCCT GCTGCAGGAG TTCGCGCTCT CCTCGCAGGA GGGCGTGGCG
CTGATGTGCC TGGCCGAAGC CCTGCTGCGC ATTCCCGACA GCGCCACGCG CGACGCGCTG
ATCCGAGACA AGATCGGTGG CGGCGACTGG GAGTCGCACC TGGGCAAGAG CCCTTCGCTG
TTCGTGAATG CGGCCACCTG GGGCCTGCTG CTGACCGGCA GGCTGGTGGC CACGCACAGC
GAACAAGGCC TGGGCGCGGC GCTGCGCCGC ATCACGGCGC GCGGCGGCGA ACCGCTGGTG
CGCAAGGGCG TGGATGTGGC CATGCGCATG ATGGGCGAGC AGTTCGTGAC CGGCGAGACC
ATCGCCCAGG CGCTGGCCAA TGCCCGCCCG CGCGAGGCCC AGGGCTTCCG CTATTCCTAC
GACATGCTGG GCGAAGCCGC GCTCACCGCG GCCGATGCCG AGCGCTACCT GCAGTCGTAC
GTGGACGCGA TCCATGCCAT CGGCAAGGCG TCCGCGGGCC GCGGCGTGTA CGAGGGCCCC
GGCATTTCCA TCAAGCTGTC GGCCCTGCAT CCGCGCTACA GCCGGGCCCA GCACGGCCGG
GTGATGCAGG AACTCCTCCC CCGCGTGCTG GGGCTGGCGG AACTGGCGCG CGGCTACGAC
ATCGGGCTGA ACATCGACGC CGAGGAAGCC GACCGGCTGG AGATTTCGCT GGACCTGCTC
GAAGCGCTGT GCGCAGCGCC ATCGCTTGCC GGCTGGAACG GGATCGGTTT CGTGATCCAG
GCCTACCAGA AGCGCTGCCC GTTCGTGATC GACCACGTGA TCGATCTCGC GCGCCGCACC
GGCCACCGCC TGATGGTGCG GCTGGTCAAG GGCGCGTACT GGGACAGCGA GATCAAGCGG
GCCCAGGTGG ACGGGCTGGA GGACTACCCG GTCTATACGC GCAAGGTGCA CACCGACGTG
TCCTACATCG CCTGCGCGCG CCGCCTGCTC GCGGCGCCGG ACGCCGTCTA TCCGCAGTTC
GCCACGCACA ACGCGCACAC GCTGGCCGCC ATCCACGAGC TGGCCGGCCC GGAGCGCTAC
ACGCCGGGCC AGTACGAATT CCAGTGCCTG CACGGCATGG GCGAGCCGCT GTACGAGCAG
GTCGTGGGCG CTGCGGGGCT GGACCGGCCC TGCCGGGTCT ATGCGCCCGT CGGCACGCAC
GAGACGCTGC TGGCCTACCT GGTGCGCCGG CTGCTGGAAA ACGGCGCCAA CACCTCGTTC
GTGAACCGCG TGGCCGACGC CACCCTGCCG CTGGAGACCC TGGTGGCCGA CCCGGTGGCG
GCGGTGGACG CGGAGCCGAT GCCGGGTGAG GTGAACCCGC GCATTCCGCT GCCGCCCGCG
CTCTATGGCC CTGCGCGCCG CAATTCCGCA GGGCTGGACC TCGCGAGCGA AGCGGTCCTC
GCGCAGCTGT CCGATGCCCT GCAGCGCCAC GCGTACCAGG ACTGGGAGGC GGTACCGCTG
CTCGCCGGGC CGGTGCAGGC AGGACCTCGC CTGCCGGTAC GCAACCCCGC CTGGCATGCG
GACGTGGTGG GCACGGTGCA GGAGGCGAGC GCAGGCGACG TGGACCAGGC GCTGGGGTGG
GCGCAGGCGG CGGCCTCCGC CTGGGCCGCG ACGCCCCCTG CGGAGCGGGC CGCCGCGCTG
CGCCGCGCCG CCGACGCGCT GGAGCAGCGC ACACCCGCCC TGCTGTCGCT GCTGGTGCGC
GAAGCGGGCA AGACCTGCGC GAACGCCGTG GCGGAGGTGC GCGAGGCGGT GGACTTCCTG
CGTTTCTATG CGGCCCAGGT GGAGACGCTG TTCGGCACGG AAACAGGCAA AGACGCATGG
GCGCCGCTCG GCCCCGTGGT ATGCATCAGC CCCTGGAACT TCCCGCTCGC CATCTTCATG
GGGCAGGTGG CGGCCGCGCT CGCCGCCGGC AACGTGGTGC TGGCCAAGCC CGCCGAGCAG
ACGCCGCTGG TGGCGGCCGA GGCGGTGCGC ATCCTGCACG GCGCCGGCGT GCCGCGCGCG
GCCGTGCAGT TGCTGCCCGG CCAGGGCGAG ACCGTGGGTG CCCGGCTGGT GGGCGACGGG
CGCGTGATGG GCGTGCTGTT CACCGGCTCC ACCGATGTGG CCCGCATCCT GCAGCGCAGC
GTGGCGGGCC GCCTGGACGC TACCGGCCGG CCGGTGCCGC TGATCGCCGA GACGGGCGGC
CAGAACGCGA TGATCGTGGA TTCATCCGCC CTGGCGGAGC AGGTGGTGGC GGATGCCGTC
GCCTCGGCCT TCGACAGCGC GGGACAGCGC TGCTCGGCGC TGCGGGTGCT GTGCCTGCAG
GAGGACGTGG CGGACCGCGT GCTGGAGATG CTGCGCGGCG CCATGGCGGA ACTGCGCATC
GGGCGGCCCG ACCAGCTCGC CACGGACGTG GGCCCCGTGA TCGACGCCGA AGCGCGCGAC
GGCATCCTGC GCCACGTGGC GGCCCTGCGC GAGCGTGGCC GCGCGGTGCA CCAGGTGCCC
GTGCCGCCGC ATGCCGGGGC CGAGGGCACC TACGTGCCGC CCACGCTGAT CGAATTGAAG
GACCTGTCGG AGCTGGAGCG CGAGGTCTTC GGCCCGGTCC TGCACGTGGT GCGCTATCCG
CGCAGCGGGC TGGACACGCT GCTGGACCGC ATCGCGGGCA CCGGCTACGG CCTCACCCAG
GGCCTGCACA CGCGCATCGA CGAAACGGTG GAACGCGTGC TGCGCCGTGC CCGCGCGGGC
AATCTCTACG TGAACCGCAA CATGGTGGGC GCGGTCGTCG GCGTGCAGCC CTTCGGCGGC
GAGGGCCTGT CGGGCACGGG GCCGAAGGCC GGCGGTCCGC TGTACCTGCT GCGACTGGTG
GCACAGGCAC CCGGCGGCGC TGCGCGGGCA GCCATCGCCG CGATGGCCGC CCCGGACACC
GGTGAAGGCC ATGCGCCCGC CGCCCCGGCC CCGCTGCAGG CCCTGGCGGA CTGGGCACGC
AGCGCCGGCC AGGGCGCGCT GGAAGCGGCC TGCCGCCAGT TCGCGCAGGA CACGCCGGCC
GGCAGCCTCC GCACGCTGCC CGGCCCCACG GGAGAGCGCA ACCAATACGG CGTGGCACCG
CGCGAACGCA TTCTTTGTCT GGCCGATGCC GATGCGGACC GGCTGCTGCA GCTGGCCGCC
GTGCTGGCCG TGGACGGGCA CGCCGTCTGG CCTTCGGCCG CGGCCACGCT GCGCGCTACT
CTGCCGGCGA CGGTGCAGGA GCGCATCGTG CTCGTGGCGG ACTGGCGTGC GCCCGCGGTG
GCCGTGGATG CCGTGCTGCA CCATGGCACC GAGGCATCGC TGCGCGAGGT GTGCCAGGCG
ATGGCCGCGC GGCCGGGGCC GATCGTCGGC GTCGCGGGCC ATGCGCCCGG CGATGCCGCG
GTGCCGCTCG AACGCCTGGT CCTGGAGCGC GCGGTCAGCA TCAACACCGC GGCGGCCGGC
GGCAATGCCA GCCTCATGAC CATGGAGTGA
 
Protein sequence
MNAPHPSLHT RPFSAFAPRP ATAAAPLRDA ITAACRIPEP EAVAPLLEEA RIDGAAARRV 
HALALRLAGG LRERKGAGGR AGWVQGLLQE FALSSQEGVA LMCLAEALLR IPDSATRDAL
IRDKIGGGDW ESHLGKSPSL FVNAATWGLL LTGRLVATHS EQGLGAALRR ITARGGEPLV
RKGVDVAMRM MGEQFVTGET IAQALANARP REAQGFRYSY DMLGEAALTA ADAERYLQSY
VDAIHAIGKA SAGRGVYEGP GISIKLSALH PRYSRAQHGR VMQELLPRVL GLAELARGYD
IGLNIDAEEA DRLEISLDLL EALCAAPSLA GWNGIGFVIQ AYQKRCPFVI DHVIDLARRT
GHRLMVRLVK GAYWDSEIKR AQVDGLEDYP VYTRKVHTDV SYIACARRLL AAPDAVYPQF
ATHNAHTLAA IHELAGPERY TPGQYEFQCL HGMGEPLYEQ VVGAAGLDRP CRVYAPVGTH
ETLLAYLVRR LLENGANTSF VNRVADATLP LETLVADPVA AVDAEPMPGE VNPRIPLPPA
LYGPARRNSA GLDLASEAVL AQLSDALQRH AYQDWEAVPL LAGPVQAGPR LPVRNPAWHA
DVVGTVQEAS AGDVDQALGW AQAAASAWAA TPPAERAAAL RRAADALEQR TPALLSLLVR
EAGKTCANAV AEVREAVDFL RFYAAQVETL FGTETGKDAW APLGPVVCIS PWNFPLAIFM
GQVAAALAAG NVVLAKPAEQ TPLVAAEAVR ILHGAGVPRA AVQLLPGQGE TVGARLVGDG
RVMGVLFTGS TDVARILQRS VAGRLDATGR PVPLIAETGG QNAMIVDSSA LAEQVVADAV
ASAFDSAGQR CSALRVLCLQ EDVADRVLEM LRGAMAELRI GRPDQLATDV GPVIDAEARD
GILRHVAALR ERGRAVHQVP VPPHAGAEGT YVPPTLIELK DLSELEREVF GPVLHVVRYP
RSGLDTLLDR IAGTGYGLTQ GLHTRIDETV ERVLRRARAG NLYVNRNMVG AVVGVQPFGG
EGLSGTGPKA GGPLYLLRLV AQAPGGAARA AIAAMAAPDT GEGHAPAAPA PLQALADWAR
SAGQGALEAA CRQFAQDTPA GSLRTLPGPT GERNQYGVAP RERILCLADA DADRLLQLAA
VLAVDGHAVW PSAAATLRAT LPATVQERIV LVADWRAPAV AVDAVLHHGT EASLREVCQA
MAARPGPIVG VAGHAPGDAA VPLERLVLER AVSINTAAAG GNASLMTME