Gene Aave_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3301 
Symbol 
ID4669206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3652015 
End bp3652920 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID639824499 
Producthypothetical protein 
Protein accessionYP_971635 
Protein GI120611957 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0516405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.954723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG CCGTGCCATC TTCCCTCCGC ACCATCGCTT CCATGGAATC CAACACCGAA 
CTCAACGAAA GCCGGCTGGC CAACGCCTGG GCCGAGCTGC ACAACCATGC CGTGAACGGC
AATCCCCTGC ATGCGGATGC CTACCGGCTC GCCTTCGCGG ACCCCGAATT CATGCTGCGC
CGCGAAACGC GCGGCATCCG CTTCCAGCTC GAGATGCTCA AGCCCGACCT CGGCCAGACC
GCCCAGGGTA TCGAGAACAC CGTGGTGGTG TACGGCAGCG CGCGCTTCCT GGCGCCCGAA
GACGCCGCGC AGCAACTGGC CGATGCCGAG GCCAGCGGGG ACGCATCCCG CATCGCGCGT
GCGCAACTGG CCGTGCGCAA TGCCCGCTAC TACGACCTCG CGCGCCGCTT CGCCGGCGTC
GTGGCGAACT ACAGCCAGCA GCTTCCACCC TCTGACCGCA TCTACATCTG CACCGGCGGC
GGCCCGGGCA TCATGGAGGC CGCCAACCGC GGCGCGCACG AAGCCGGAGC GCTCAACGTG
GGCCTCAACA TCGCCCTGCC GCACGAGCAG AGCGGCAACC GCTACATCTC GCCGTCGCTG
TCCTTCAAGT TCCACTACTT CGCGCTGCGC AAGATGCACT TCATGATGCG CGCGAAGGCG
CTGGTGGCGT TCCCTGGCGG CTTCGGCACG CTCGACGAGT TGTTCGAGGT ACTCACGCTG
GTGCAGACCG GCAAGGCCAG GCCCGTACCC ATCGTGCTCT TCGGCACCGA ATTCTGGAAA
AAGCTCGTCA ACTTCGACGC GCTGGTGGAA CAGGGCACGA TCTCGGCGGA CGATCTGAAC
CTCTTCCGCC ACACGGACGA TCCGGAAGAG GCCTGGGGGT TCATCAAGGC GTTCTACAAA
TTGTGA
 
Protein sequence
MATAVPSSLR TIASMESNTE LNESRLANAW AELHNHAVNG NPLHADAYRL AFADPEFMLR 
RETRGIRFQL EMLKPDLGQT AQGIENTVVV YGSARFLAPE DAAQQLADAE ASGDASRIAR
AQLAVRNARY YDLARRFAGV VANYSQQLPP SDRIYICTGG GPGIMEAANR GAHEAGALNV
GLNIALPHEQ SGNRYISPSL SFKFHYFALR KMHFMMRAKA LVAFPGGFGT LDELFEVLTL
VQTGKARPVP IVLFGTEFWK KLVNFDALVE QGTISADDLN LFRHTDDPEE AWGFIKAFYK
L