| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3299 |
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| Symbol | |
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| ID | 4669223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3650253 |
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| End bp | 3651566 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824497 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_971633 |
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| Protein GI | 120611955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.383869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.375473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC TGATGGTGGG CGGCATCCTG TTGCTGCTGA TGATCGTGCT GCTCGCGGGC
GGCGTCTGGA TCGCGATGAC GCTGGCCATC TGCGGCTGGG TCGGGCAGGC CTTCTTCACC
AGCACGCAGC CCGGCAAGAA CCTGTTCTCC GCCTTCTGGG AGAGCAACGC GAGCTGGGAA
CTGGCCGCGC TGCCACTTTT CATCTGGATG GGAGAGATCC TGTTCCGCAC GCGGCTGAGC
GAGGAGATGT TCGAAGGGCT GCGGCCCTGG CTCAACCGGG TGCCGGGCCG GCTGATGCAC
ACCACCATCC TGGGCTGCGG CATCTTCGGC TCGGTGTCGG GCTCCTCGGC CGCCACCTGC
GCCACCATCA GCAAGGTCGC CCTGCCGGAA CTGCTGCGGC GCGGCTACGA CGAGCGCCTG
GCGCTCGGCT CGCTGGCCAC GGCCGGCACG CTGGGCATCC TCATCCCGCC CTCCATCACC
ATGGTGGTGT ACGCGGTGGC CGCCGATGCC TCCATCATCC GGATCTTCCT GGCGGGCTTC
CTGCCGGGGC TGCTGCTCAT GCTGCTCTTC TCGGGCTATA TCGGCTGGTG GAGCCTGCGG
CATCCCGACC GGGTGCCGGC GGCCGACCCG CCCACCACGC TGCGCCAGAA GATAAGGCGG
TCGGGCAATC TCATTCCCGT CACGGCGCTG ATCGTGTTCA TCGTCTGGGT GCTGGTCGCG
GGCTACGCCA CGGCCACCGA ATGCGCGGCC TTCGGCGTGG CGGGATCCCT GGGGCTGGCC
CTCTGGAGCC GGTCGCTGAC CTGGCGGAAT TTTTCCGAAG GACTGATGGG CGCGACACGC
ACCAGCTGCA TGATCATGTT CATCCTCGCG GGCGCGGCCT TCCTCACCAA GACCATGGCC
TTCACCGGCA TACCGCGCGA GCTGGCCGAA TGGGTCGAAT CCATGCACCT GCCGCCCTAC
GCGCTGATCG CGGTGCTGAC ACTGGTCTAT CTGGTGCTGG GCACCGCGCT CGACGGCATC
AGCATGATCG TGCTCACCAG CGCGGTGGTA CTGCCGATGA TCCAGAAAGC CGGCTTCGAC
CTGGTGTGGT TCGGCATCTT CATCGTGCTG CTGGTGGAGA TCGCCGAGGT CACGCCGCCG
GTAGGGTTCA ACCTCTTCGT GCTGCAGAAC ATGACGGGCA AGGACAGCAA TACCATCGCC
CGCGCTGCCA TCCCGTTCTT CGTATGCCTG GTGGTTTGCA TCGCGCTCAT CACCCTCTTC
CCGCAGATCG TCACCGTGCT GCCGGACCTG GTGATGGGCA AGGACGGAGG GTGA
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| Protein sequence | MDILMVGGIL LLLMIVLLAG GVWIAMTLAI CGWVGQAFFT STQPGKNLFS AFWESNASWE
LAALPLFIWM GEILFRTRLS EEMFEGLRPW LNRVPGRLMH TTILGCGIFG SVSGSSAATC
ATISKVALPE LLRRGYDERL ALGSLATAGT LGILIPPSIT MVVYAVAADA SIIRIFLAGF
LPGLLLMLLF SGYIGWWSLR HPDRVPAADP PTTLRQKIRR SGNLIPVTAL IVFIVWVLVA
GYATATECAA FGVAGSLGLA LWSRSLTWRN FSEGLMGATR TSCMIMFILA GAAFLTKTMA
FTGIPRELAE WVESMHLPPY ALIAVLTLVY LVLGTALDGI SMIVLTSAVV LPMIQKAGFD
LVWFGIFIVL LVEIAEVTPP VGFNLFVLQN MTGKDSNTIA RAAIPFFVCL VVCIALITLF
PQIVTVLPDL VMGKDGG
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