Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3298 |
Symbol | |
ID | 4669229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3649634 |
End bp | 3650167 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639824496 |
Product | hypothetical protein |
Protein accession | YP_971632 |
Protein GI | 120611954 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.684263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCGCT TCCTCGACCG CCTGTACCTC GCGGCAGGCG CCCTGGGCGC CGCCTGCGTC GCGCTGATCT GCGCGCTGAT GATCGCCCAG AGCGTCCTGC GCGAGGCCGG GGTGCGCACC GGCGCGCTGA ACGACGTGGT CGCCTGGCTC TGCGCGGCGG CCGCCTTCTT CGCCATGGCC CATGCCTTCA AGCACGGCGA TTTCGTGCGC GTCACCCTGC TGCTCGAAAG GCTCCCGCCG CGCCCGCGGC GCGCTTTCGA ACTGGCGGCG CTCGCCATCG GCACGGTGGC GACGGCCTAT CTCGCCTGGT CCGCCTGCCT GTTCACCCAT GAGAGCTGGG AGTTCAATGA CGTGGCCCAG GGCCTGCTGC CGCTGCCGAT GTGGATCCCC CAGCTGAGCT TCGCGATCGG CTCGGTGCTG CTGCTGGTGG CGGTCCTGGA CGAATTCCTC ATCGTGCTGC GCGGCGGGAC GCCGAGCTTC GTGCGCGCGG TCGAGGAGCG CCATGCACGT GGGGACTTCT CCGCCGACAT CTGA
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Protein sequence | MRRFLDRLYL AAGALGAACV ALICALMIAQ SVLREAGVRT GALNDVVAWL CAAAAFFAMA HAFKHGDFVR VTLLLERLPP RPRRAFELAA LAIGTVATAY LAWSACLFTH ESWEFNDVAQ GLLPLPMWIP QLSFAIGSVL LLVAVLDEFL IVLRGGTPSF VRAVEERHAR GDFSADI
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