Gene Aave_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3298 
Symbol 
ID4669229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3649634 
End bp3650167 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content71% 
IMG OID639824496 
Producthypothetical protein 
Protein accessionYP_971632 
Protein GI120611954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.684263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGCT TCCTCGACCG CCTGTACCTC GCGGCAGGCG CCCTGGGCGC CGCCTGCGTC 
GCGCTGATCT GCGCGCTGAT GATCGCCCAG AGCGTCCTGC GCGAGGCCGG GGTGCGCACC
GGCGCGCTGA ACGACGTGGT CGCCTGGCTC TGCGCGGCGG CCGCCTTCTT CGCCATGGCC
CATGCCTTCA AGCACGGCGA TTTCGTGCGC GTCACCCTGC TGCTCGAAAG GCTCCCGCCG
CGCCCGCGGC GCGCTTTCGA ACTGGCGGCG CTCGCCATCG GCACGGTGGC GACGGCCTAT
CTCGCCTGGT CCGCCTGCCT GTTCACCCAT GAGAGCTGGG AGTTCAATGA CGTGGCCCAG
GGCCTGCTGC CGCTGCCGAT GTGGATCCCC CAGCTGAGCT TCGCGATCGG CTCGGTGCTG
CTGCTGGTGG CGGTCCTGGA CGAATTCCTC ATCGTGCTGC GCGGCGGGAC GCCGAGCTTC
GTGCGCGCGG TCGAGGAGCG CCATGCACGT GGGGACTTCT CCGCCGACAT CTGA
 
Protein sequence
MRRFLDRLYL AAGALGAACV ALICALMIAQ SVLREAGVRT GALNDVVAWL CAAAAFFAMA 
HAFKHGDFVR VTLLLERLPP RPRRAFELAA LAIGTVATAY LAWSACLFTH ESWEFNDVAQ
GLLPLPMWIP QLSFAIGSVL LLVAVLDEFL IVLRGGTPSF VRAVEERHAR GDFSADI