| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3297 |
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| Symbol | |
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| ID | 4669622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3648625 |
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| End bp | 3649626 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824495 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_971631 |
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| Protein GI | 120611953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.752092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCA GAGCCGTTCC CCTCCTCGCC CTCGCCCTGG CCGGCGTCCT TTCCGCAGCG
CCGTCCGCCG CGCAGGTCCG CTGGGACCTC GCGGCCGCGT ACCCCGCCAC CAACTTCCAC
ACCGAGCACC TGATGCAGTT CGCCAAGGAT GCGGAAGCCG CGACCGGCGG CAAGCTGCGC
ATCACGGTGC ACGCGAACGC ATCGCTCTTC AAGGCCAACG AGATCAAGCG CGCGGTGCAG
GGCGGCCAGG CGCCGGCGGG AGAGATCCTG CTGCCCAACT TCGAGAACGA GAACGCCGTC
TTCGGCGTGG ACGGCATCCC CTTCCTCGCC ACCTCGTACA CCGATTCCCG GCGGCTGTAC
GAAGCCCAGA AGCCCGTTCT GGAGCGCCTG CTCGGCGCCC AGGGACTGCG CCTGCTCTAT
GCGGTGGCGT GGCCACCGCA GGGCATCTAC ACCAAGAAGG AAATCGGCTC GGTGGCGGAC
CTGCGCGGCA TCAAGTGGCG CGCCTACAGC CCCGCCACCG CCAGGATCGC GGAGCTCATC
GGCGCGCAGC CGGTGACCAT CCAGGCCGCG GAACTCTCGC AGGCGATGGC GACCGGCGCG
GTGGAGTCGA TGATGACGTC CGGCTCCACC GGCTACGACA GCAAGCTCTA CGAGAGCATC
AAGTATTTCT ACGACACGCA GGCCTGGCTG CCGAAGAATG CCGTCATCGT GTCGCGCAAG
GCCTTCGACG CGCTCGACAA ACCCGCGCAG GACGGGTTGC TCAAGGCCGC CGCGGAGGCC
GAGACGCGCG GCTGGAAGCT GAGTGCGGAC AGGAACGAGT GGTACAAGAA GGCCCTGACC
GACAAGGGCA TGAAGATCCT GCCGCCGCCG GCCAAGCTCA CCGCCGACCT GCGCCAGGTG
GGCGACGTGA TGCTGGCCGA CTGGCTGCGC AAGGCGGGAC CGGACGGCGA GGCCATCATC
GCGGCCTACC GCAAGTCCGC ACCGGTCGCC GCGGCCAAGT GA
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| Protein sequence | MQRRAVPLLA LALAGVLSAA PSAAQVRWDL AAAYPATNFH TEHLMQFAKD AEAATGGKLR
ITVHANASLF KANEIKRAVQ GGQAPAGEIL LPNFENENAV FGVDGIPFLA TSYTDSRRLY
EAQKPVLERL LGAQGLRLLY AVAWPPQGIY TKKEIGSVAD LRGIKWRAYS PATARIAELI
GAQPVTIQAA ELSQAMATGA VESMMTSGST GYDSKLYESI KYFYDTQAWL PKNAVIVSRK
AFDALDKPAQ DGLLKAAAEA ETRGWKLSAD RNEWYKKALT DKGMKILPPP AKLTADLRQV
GDVMLADWLR KAGPDGEAII AAYRKSAPVA AAK
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