| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3290 |
|---|
| Symbol | |
|---|
| ID | 4668568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3639374 |
|---|
| End bp | 3639739 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639824488 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit C |
|---|
| Protein accession | YP_971624 |
|---|
| Protein GI | 120611946 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit |
|---|
| TIGRFAM ID | [TIGR00941] Multicomponent Na+:H+ antiporter, MnhC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.166006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCG TTCTGGCCGT CGCGATCGGC GTGCTCGCGG GATCGGGTGT GTGGCTGGTG
CTGCGCCCCC GTACCTACCA GGTCATCATG GGACTGGCGC TGCTGTCGTA CGCGGTGAAC
CTGTTCATCT TCAGCATGGG CCGCCTGGGC CTCGCCGTGG GCAAGGAGCC CGTGCTGGTG
GAGGGCGTGG CGAAGGATCT GCAGCACTAT GCGGACCCGA TGCCGCAGGC GCTGGTGCTG
ACGGCCATCG TGATCGGCTT CGCCATGACG GCGCTGTTCC TGGTGGTGCT GCTCGCCTCG
CGCGGCATGT CGGGCACCGA CCATGTGGAC GGATCGCATT CGCGCGACGT GCAGGAGATG
CCATGA
|
|---|
| Protein sequence | MEIVLAVAIG VLAGSGVWLV LRPRTYQVIM GLALLSYAVN LFIFSMGRLG LAVGKEPVLV
EGVAKDLQHY ADPMPQALVL TAIVIGFAMT ALFLVVLLAS RGMSGTDHVD GSHSRDVQEM
P
|
|---|
| |