Gene Aave_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3288 
Symbol 
ID4668521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3635085 
End bp3636242 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content70% 
IMG OID639824486 
Producttetratricopeptide repeat protein 
Protein accessionYP_971622 
Protein GI120611944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.190691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTG ACCTGAGCTG GCTCCTGCTG GGGCTGCCGC TGGCGTTCGT GCTGGGCTGG 
CTGGCGTCCC GCTTCGATCT GCGCCAGTTG CGCCAGGAAA ACCGGCGGGC ACCCAAGGCC
TATTTCAAGG GCCTGAACTA CCTGCTCAAC GAGCAGCAGG ACCAGGCGAT CGACGCATTC
ATCGAGGCGG TGCAGAACGA TCCGGACACG TCGGAACTGC ATTTCGCGCT CGGCAACCTG
TTCCGCCGGC GTGGCGAATA CAACCGCGCG GTGCGCGTGC ACGAGCACCT GCTGTCCCGA
GGCGACCTGA GCCGGGCCGA CCGCGAGCGC GCGCAGCACG CGCTGGCGCT GGATTTCCTC
AAGGCCGGGC TGCTGGACCG CGCTGAAGAT GCGCTGCAGC GGCTGGAAGG CACGCCCTTC
GAGAGCCAGG CGCGCATGGC GCTGCTGGCC ATCTACGAAC GCTCGCGGGA CTGGCTCCAG
GCCACCGCGA TCGCGCGCAA GATGCATGGA TCCCACCAGG GCGATTTCAG CGCCCGGCAG
GCCCATTACC TGTGCGAGCA GGCGCTGGCG CGTGCTGCCC AGGGCGACCT GGATGCGGCG
ATGGCGCAGT TCGAGGAAGC CCGGGCGACC GCGCCGGATG CGCCGCGCCC GCGCATCGAG
CTTGCCCGGC TGCAGCAGCG CCGCGGCCAT GCCGAGGCGG CCATGGCCAC GCTCCAGGAA
CTGGCCCGCC AGTCCCCCGG CGCCCTGCCG CTGGCCGCGC CGCTGCTGAT CGAACTGGCG
GGTGCGACCG GGCGCCAGAG CGACGTGCTG CAGTTGCTGA AGGAGCACTA TGCCCGCGCG
CCTTCGCTGG ACGTGCTCGA CGCGATCGTG GCCATGGAGT CTGCCGCAGC CGATCCCGCC
CGGTCGCCGC GCGACTGGTA TGTACGCCAC CTGGAGCAGG AGCCCTCGCT CGTCGCCGCC
GCCAAATGGC TGGCGCAGGA AAAACTCGAA CACGAGGAAT TCCATCCGCA GGTCCAGCGG
GCGCTGGACC AGGCCGCCAA GCCGCTCACG CGCTATCGCT GCGCGGCCTG CGGATTCGAG
GCCCGGCAGC ATTTCTGGCA ATGCCCCGGC TGCCAGAACT GGGACAGCTA TCCCGCCCGG
CGCGTCGAAG AGCTGTGA
 
Protein sequence
MEFDLSWLLL GLPLAFVLGW LASRFDLRQL RQENRRAPKA YFKGLNYLLN EQQDQAIDAF 
IEAVQNDPDT SELHFALGNL FRRRGEYNRA VRVHEHLLSR GDLSRADRER AQHALALDFL
KAGLLDRAED ALQRLEGTPF ESQARMALLA IYERSRDWLQ ATAIARKMHG SHQGDFSARQ
AHYLCEQALA RAAQGDLDAA MAQFEEARAT APDAPRPRIE LARLQQRRGH AEAAMATLQE
LARQSPGALP LAAPLLIELA GATGRQSDVL QLLKEHYARA PSLDVLDAIV AMESAAADPA
RSPRDWYVRH LEQEPSLVAA AKWLAQEKLE HEEFHPQVQR ALDQAAKPLT RYRCAACGFE
ARQHFWQCPG CQNWDSYPAR RVEEL