Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3288 |
Symbol | |
ID | 4668521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3635085 |
End bp | 3636242 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639824486 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_971622 |
Protein GI | 120611944 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.190691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG ACCTGAGCTG GCTCCTGCTG GGGCTGCCGC TGGCGTTCGT GCTGGGCTGG CTGGCGTCCC GCTTCGATCT GCGCCAGTTG CGCCAGGAAA ACCGGCGGGC ACCCAAGGCC TATTTCAAGG GCCTGAACTA CCTGCTCAAC GAGCAGCAGG ACCAGGCGAT CGACGCATTC ATCGAGGCGG TGCAGAACGA TCCGGACACG TCGGAACTGC ATTTCGCGCT CGGCAACCTG TTCCGCCGGC GTGGCGAATA CAACCGCGCG GTGCGCGTGC ACGAGCACCT GCTGTCCCGA GGCGACCTGA GCCGGGCCGA CCGCGAGCGC GCGCAGCACG CGCTGGCGCT GGATTTCCTC AAGGCCGGGC TGCTGGACCG CGCTGAAGAT GCGCTGCAGC GGCTGGAAGG CACGCCCTTC GAGAGCCAGG CGCGCATGGC GCTGCTGGCC ATCTACGAAC GCTCGCGGGA CTGGCTCCAG GCCACCGCGA TCGCGCGCAA GATGCATGGA TCCCACCAGG GCGATTTCAG CGCCCGGCAG GCCCATTACC TGTGCGAGCA GGCGCTGGCG CGTGCTGCCC AGGGCGACCT GGATGCGGCG ATGGCGCAGT TCGAGGAAGC CCGGGCGACC GCGCCGGATG CGCCGCGCCC GCGCATCGAG CTTGCCCGGC TGCAGCAGCG CCGCGGCCAT GCCGAGGCGG CCATGGCCAC GCTCCAGGAA CTGGCCCGCC AGTCCCCCGG CGCCCTGCCG CTGGCCGCGC CGCTGCTGAT CGAACTGGCG GGTGCGACCG GGCGCCAGAG CGACGTGCTG CAGTTGCTGA AGGAGCACTA TGCCCGCGCG CCTTCGCTGG ACGTGCTCGA CGCGATCGTG GCCATGGAGT CTGCCGCAGC CGATCCCGCC CGGTCGCCGC GCGACTGGTA TGTACGCCAC CTGGAGCAGG AGCCCTCGCT CGTCGCCGCC GCCAAATGGC TGGCGCAGGA AAAACTCGAA CACGAGGAAT TCCATCCGCA GGTCCAGCGG GCGCTGGACC AGGCCGCCAA GCCGCTCACG CGCTATCGCT GCGCGGCCTG CGGATTCGAG GCCCGGCAGC ATTTCTGGCA ATGCCCCGGC TGCCAGAACT GGGACAGCTA TCCCGCCCGG CGCGTCGAAG AGCTGTGA
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Protein sequence | MEFDLSWLLL GLPLAFVLGW LASRFDLRQL RQENRRAPKA YFKGLNYLLN EQQDQAIDAF IEAVQNDPDT SELHFALGNL FRRRGEYNRA VRVHEHLLSR GDLSRADRER AQHALALDFL KAGLLDRAED ALQRLEGTPF ESQARMALLA IYERSRDWLQ ATAIARKMHG SHQGDFSARQ AHYLCEQALA RAAQGDLDAA MAQFEEARAT APDAPRPRIE LARLQQRRGH AEAAMATLQE LARQSPGALP LAAPLLIELA GATGRQSDVL QLLKEHYARA PSLDVLDAIV AMESAAADPA RSPRDWYVRH LEQEPSLVAA AKWLAQEKLE HEEFHPQVQR ALDQAAKPLT RYRCAACGFE ARQHFWQCPG CQNWDSYPAR RVEEL
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