Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3276 |
Symbol | |
ID | 4667780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3620876 |
End bp | 3621454 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639824474 |
Product | hypothetical protein |
Protein accession | YP_971610 |
Protein GI | 120611932 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.413284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTCTC TGGACAAGAT ACTGTGCCGC CTGTTCGGTT ATCGCTGTCC GCTGACGGTC GAGCTCGATG GGGACAGCCT GCTGCACGGC TATGGCGTCC CGATCACACC GGTGCAGCGC ATCCAGGCCG CCCGGCCGCG GTGGAAACTG GATGACCGCA CGGCCAATGG GCTGCGCATG GAGACCGCCA TCCAGACGTT TCCCTCCGAG CCGCACACGG CCAGGATCAT CGTGATCGCC CTGGGAGCCA ACGACGCTTT CGGCATGGTG CCTGCCGATA CTTATCGCGC GGATCTCGAC AAGGCCGTGA GCGTGGTGCG CGCGGCCGGG GCCAGGCCGG TCTTCACGGG ATTGGCGCGC ATGCCCGCCG ACCGTTTTCC GGCGGAATGG ATCGCCAACT GGGAAGCGCT CAACGCCGTG ATGCACGATA TCGCGCAGCG CGAGGGCATC GAGCATGCGG GCTGGGATGC CGACTACCGG GGAGAGCAGG ATCTCCAGCC CGATTTTGTC CATCGCTCGC AGGAGGCCAG CGACCGTTTC GCCGAGTTGC TGATCGCAGC CATCGAGCGC GCAGCCTAG
|
Protein sequence | MDSLDKILCR LFGYRCPLTV ELDGDSLLHG YGVPITPVQR IQAARPRWKL DDRTANGLRM ETAIQTFPSE PHTARIIVIA LGANDAFGMV PADTYRADLD KAVSVVRAAG ARPVFTGLAR MPADRFPAEW IANWEALNAV MHDIAQREGI EHAGWDADYR GEQDLQPDFV HRSQEASDRF AELLIAAIER AA
|
| |