Gene Aave_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3260 
Symbol 
ID4666835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3604835 
End bp3606103 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID639824460 
Producthypothetical protein 
Protein accessionYP_971596 
Protein GI120611918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.209083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.282875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGACAA CTCGTTACTT GCGAGTAGGC TCCACACCGT ACATACAGAG AGGGGATGCA 
ATGAGTGACG CTCACGGTGA TGACGGGATC ACCTTGTCGA GGGTTGTTGA GGTGATGGCG
CGGCGACTGA ACCACTTGGT GGGAGCGAGG TGCTTGCGAA GCAACGGCGT AGCGGTCGGA
AGGAATTGGA CCGAGACGCT TGCTAAGGTC TCGAAGGTCA ACCAAGACAC ACTGCTTGCC
AAGGATGTTA CGCAGCAAGC TTTGGAACTG CTCCGGGTTC ATTCGCTCAT TGGAAATAAG
CGAGTCACTT GGTACGATCT TAAAGGCCTG AATGCTGATA TGGTCACGAG CTTTTCAAAT
TGGCTCGACA AGGCACTTGA CTCTCCTCCA TTAGATGAAT CATGGGTAAC ACAGTACCCG
TTCCCTTTGA CGCCGATTGA TGATACTTCG CTTAGAAATT TTGATCGGTC AAAGCCAAAA
TTGGTTAAAG TGTGGCAAGA AGGGGGGCGC ACTTACTTTC AATTTTTCAG TGTGCGCACT
TACAACGAGC GTGTCGAGCT GGCGCCTACA TCTTTTTCAA AAGATGCATA TGAAAATATC
CGGCAGTATT CCAAAATTAT AGGAATAAAG CAAAAATTTG CTCCCTGCTT TGATACCGTC
GTTGTTGATC GTTCAGAACA GCGAATTGAA TTGAGAGTAG ATGTGCCAAG TGCACATGTT
CCCAATGAAA TACAGCAGAT CGCAAATCAG CATGTACTTG GGTCGTTCAA CGCTCTAAGC
TACCAGGGCT GCCAAACTTC GATTGTCGGT TTATCTGCAT TCGACTTCTT TCCTATGTTG
CTTCCGCTGT ACAGAGATAA TACAGCCGGC AAAGTGAGTA CGCTTGGTTT TGCGGCCTAT
GCGGAAGATT CTGCATCAAA CAACACTGGC CGGCCAATTA GAAAAAAGGG TCACGACCTA
CGGGAGGATA AATTTCATAA GAGTGGAGCG GCGGCAGTCG AAGATCTTCG TCCTTACACG
ATTGGTGTCG AATGGCCAGC TCTTGGCCGC AAAGACGAAG TGATCGAACT GGAAATACCG
GGGAGTATTC ATTGTCTGTA TAAATCACGC GCTCTGCACG TGGCAAATCT TAGCGGGTGT
GTAACATTCG CTGAGTACGA GTTTCTGACC CACAAGATTT GGCACTACTC TGAAATTGCG
GCAAAGCTTG CCGCTGAAGC GCTTAGTCAA GCACAGAAAG CTATTGAGTC GGCGAAGGCA
GGGGCTTGA
 
Protein sequence
MLTTRYLRVG STPYIQRGDA MSDAHGDDGI TLSRVVEVMA RRLNHLVGAR CLRSNGVAVG 
RNWTETLAKV SKVNQDTLLA KDVTQQALEL LRVHSLIGNK RVTWYDLKGL NADMVTSFSN
WLDKALDSPP LDESWVTQYP FPLTPIDDTS LRNFDRSKPK LVKVWQEGGR TYFQFFSVRT
YNERVELAPT SFSKDAYENI RQYSKIIGIK QKFAPCFDTV VVDRSEQRIE LRVDVPSAHV
PNEIQQIANQ HVLGSFNALS YQGCQTSIVG LSAFDFFPML LPLYRDNTAG KVSTLGFAAY
AEDSASNNTG RPIRKKGHDL REDKFHKSGA AAVEDLRPYT IGVEWPALGR KDEVIELEIP
GSIHCLYKSR ALHVANLSGC VTFAEYEFLT HKIWHYSEIA AKLAAEALSQ AQKAIESAKA
GA