Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3250 |
Symbol | |
ID | 4667104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3590105 |
End bp | 3592411 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824449 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_971586 |
Protein GI | 120611908 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGC GCCTGACCCT GCACTACCGA ATGCTCCTGC TGGCCATCGC GCTGTCGGTC GGCATCGGGG CGCTCTTCGC GCGGGCCATC CTGACCATCC GCGACGATGA ATGGAACTAC GCGCGCGACG CCAACACGGC GCTCGCGCGC ACGCTCGAGC AGAGCATCGG GCGCACGCTC GACAGTTTCG ACCATTCACT GGCGGGCGTG GTGGAGATCC TGGGCCGGCC CGACCTCGCC AGCCTGCCGG CCGACGTGCA GCACGCCATG CTGTTCGACC ACTCGCTGCG CAGCCGGGGC CTGGGCTCCG TGGCGGTGAT CGACCCGGGG GGCAACGTCC TGATGTCGGC CGGCGCCACG CCCGCCAGCA AGATGCCCAA CCTGGCCGAC CGGGACTACT TCCAGTTCCA CATGCGCGAG AGGGACCGGG GCGTGTACGT CGGCCGGCCC ATCCGGGGAC GGGTGACGGG CGAGTACAGC CTGGCGATGA GCCGCGCCTT TTTTCACCAG GACGGCAGTT TCGGCGGGGT GGTCGTGGGC ACGATCCGGC TCAGCTACTT CAACGAACTG TTCGGATCGC TCGGCCTGGG CCCCCAGAGC CTCGCCGAGA TCGTCCGCAC GGACGGCACG GCGGTTTCGC GCTTTCCCGG GCAGATCCGC GGCGTCGGAG AGCCGGTGGC GCACGCCCAT CTGGAGCGCC TCCTGCAGGA ACGCGAAGGC CATTTCACCG AATCCTCGGA CGAGGCGCAG GACGGCATCC CGCGGCTCCA CGCCTTCCGG CACGTGAGAG ATTACCCGCT CGTGGTTTCC GTGGCCCAGT CGGTGGACAG CATCCTCTCG CAATGGCAGC GCAACGCGGT GATCCTGGGG AGCTTCGCCG CCCTGCTCAT GGCGGCCTGC CTGGGCCTCG CCCTGCTGTT CGCGCGCGAG CTGGCGCGCC GGCAGAACGT GGCCGCGCAG CTGCAGCGCG CGCAGCACGA CATGCGCACC ATCCTCGACA ACCTGCCGTC GCTGGTCGCC TACTGGGACC GCAATCTGCG CAACCGCTTC GCCAACCAGG CCTATCTCGA CTGGCTCGGC ATGACGCAGG AAGAGATCCA GGGCCGGCCC ATCGAGGAGC TGCTGCCCGC CGAGGCCTGC GAGACCGCTC GGCCGTACCT GCAGCGTGCG CTGCAGGGCC GCAGGCAGGT CTATGAACGG TCGGTGCCGT TATCGTCGGG CGAAGTGCGG CACATGATGG TGTCCTGCGT TCCGGACATG GACGGAGCGC AGGCCCAGGG CATCTTCGTG CAGATCGACG ACCTCACCGA ACGCAAGCGC ATGGAAGACC TGCTCTTCGA GGAGAAGGAA CTGGTCCGCC TCACGCTGCA GTCCATCGGC GACGCCGTGC TGTGCACGGA CGCCTCGGGC CACGTGACCT ACATCAACCC CGTGGCAGAG AAGATAACGG GCTGGCAGGC CTTCCACGCC GCCGGCCGGG ACATCGACGA GGTCGCCCCC CTCTGCACCG CCAACGGTGT GCCCGCGGAG CATCCGGCCC GCAGCGCGCT GTCGGGCGCG CAAGCCATAC CGGCCGTGCG CGGCCTCGTG CTGCACTGTC GCGACGGCCG CCGCATCGAC GTGGAAAACA GCGTCAGCCC CATCACCGAC CGGCACGGAC AGATCACGGG CACCGTGATG GTGCTGCGGG ACGTGACCGA GGCGACGGCA CTGGCACGCC GCATGGCCCA TCTCGCGCAG CACGACATGC TGACCGACCT GCCCAACCGG GTGCTGCTGC AGGACCGCGC CCAGCAGGCC ATCGCCCAGG CACGCCGCGA CGGACACGGC CTCGCCCTGA TGTATATCGA CCTCGACGGC TTCAAGCAGG TGAACGACAC GCTGGGCCAC GATGCCGGCG ATCTGCTGCT GGTCCAGGTC GCCCGGCGCT TCTCCCGCTG CGTGCGCCGC TCGGACACCG TCTGCCGCCA GGGCGGCGAC GAGTTCATCG TGCTCCTGCC CATCGTGGAA CATCCCGAGC AGGCCTGCCA CGTCGCCCGC AAGATCGTGG CCGCCTGCGA GGCGCCCTTC GACCTGCAGG GCGAGTCGCG GCGGATCGGC CTCAGCGGCG GTATCGCGAT GTTCCCGCAG CACGGCTCCA GCTTCGAGGA ACTGTGCCGC AGCGCCGACG TGGCGCTCTA CACCGCCAAG CGTGCAGACA AGCAGCATTT CCGGATGTAT GCGGGCCCCG AACAGGAGCC CGAGGTCGTT CCGCCTGCAG CGCCTGCCCC CGGACCGGCG CCCTCCGGCG CGCAGCCGCC ACGCTGA
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Protein sequence | MSMRLTLHYR MLLLAIALSV GIGALFARAI LTIRDDEWNY ARDANTALAR TLEQSIGRTL DSFDHSLAGV VEILGRPDLA SLPADVQHAM LFDHSLRSRG LGSVAVIDPG GNVLMSAGAT PASKMPNLAD RDYFQFHMRE RDRGVYVGRP IRGRVTGEYS LAMSRAFFHQ DGSFGGVVVG TIRLSYFNEL FGSLGLGPQS LAEIVRTDGT AVSRFPGQIR GVGEPVAHAH LERLLQEREG HFTESSDEAQ DGIPRLHAFR HVRDYPLVVS VAQSVDSILS QWQRNAVILG SFAALLMAAC LGLALLFARE LARRQNVAAQ LQRAQHDMRT ILDNLPSLVA YWDRNLRNRF ANQAYLDWLG MTQEEIQGRP IEELLPAEAC ETARPYLQRA LQGRRQVYER SVPLSSGEVR HMMVSCVPDM DGAQAQGIFV QIDDLTERKR MEDLLFEEKE LVRLTLQSIG DAVLCTDASG HVTYINPVAE KITGWQAFHA AGRDIDEVAP LCTANGVPAE HPARSALSGA QAIPAVRGLV LHCRDGRRID VENSVSPITD RHGQITGTVM VLRDVTEATA LARRMAHLAQ HDMLTDLPNR VLLQDRAQQA IAQARRDGHG LALMYIDLDG FKQVNDTLGH DAGDLLLVQV ARRFSRCVRR SDTVCRQGGD EFIVLLPIVE HPEQACHVAR KIVAACEAPF DLQGESRRIG LSGGIAMFPQ HGSSFEELCR SADVALYTAK RADKQHFRMY AGPEQEPEVV PPAAPAPGPA PSGAQPPR
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