| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3250 |
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| Symbol | |
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| ID | 4667104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3590105 |
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| End bp | 3592411 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824449 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_971586 |
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| Protein GI | 120611908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC GCCTGACCCT GCACTACCGA ATGCTCCTGC TGGCCATCGC GCTGTCGGTC
GGCATCGGGG CGCTCTTCGC GCGGGCCATC CTGACCATCC GCGACGATGA ATGGAACTAC
GCGCGCGACG CCAACACGGC GCTCGCGCGC ACGCTCGAGC AGAGCATCGG GCGCACGCTC
GACAGTTTCG ACCATTCACT GGCGGGCGTG GTGGAGATCC TGGGCCGGCC CGACCTCGCC
AGCCTGCCGG CCGACGTGCA GCACGCCATG CTGTTCGACC ACTCGCTGCG CAGCCGGGGC
CTGGGCTCCG TGGCGGTGAT CGACCCGGGG GGCAACGTCC TGATGTCGGC CGGCGCCACG
CCCGCCAGCA AGATGCCCAA CCTGGCCGAC CGGGACTACT TCCAGTTCCA CATGCGCGAG
AGGGACCGGG GCGTGTACGT CGGCCGGCCC ATCCGGGGAC GGGTGACGGG CGAGTACAGC
CTGGCGATGA GCCGCGCCTT TTTTCACCAG GACGGCAGTT TCGGCGGGGT GGTCGTGGGC
ACGATCCGGC TCAGCTACTT CAACGAACTG TTCGGATCGC TCGGCCTGGG CCCCCAGAGC
CTCGCCGAGA TCGTCCGCAC GGACGGCACG GCGGTTTCGC GCTTTCCCGG GCAGATCCGC
GGCGTCGGAG AGCCGGTGGC GCACGCCCAT CTGGAGCGCC TCCTGCAGGA ACGCGAAGGC
CATTTCACCG AATCCTCGGA CGAGGCGCAG GACGGCATCC CGCGGCTCCA CGCCTTCCGG
CACGTGAGAG ATTACCCGCT CGTGGTTTCC GTGGCCCAGT CGGTGGACAG CATCCTCTCG
CAATGGCAGC GCAACGCGGT GATCCTGGGG AGCTTCGCCG CCCTGCTCAT GGCGGCCTGC
CTGGGCCTCG CCCTGCTGTT CGCGCGCGAG CTGGCGCGCC GGCAGAACGT GGCCGCGCAG
CTGCAGCGCG CGCAGCACGA CATGCGCACC ATCCTCGACA ACCTGCCGTC GCTGGTCGCC
TACTGGGACC GCAATCTGCG CAACCGCTTC GCCAACCAGG CCTATCTCGA CTGGCTCGGC
ATGACGCAGG AAGAGATCCA GGGCCGGCCC ATCGAGGAGC TGCTGCCCGC CGAGGCCTGC
GAGACCGCTC GGCCGTACCT GCAGCGTGCG CTGCAGGGCC GCAGGCAGGT CTATGAACGG
TCGGTGCCGT TATCGTCGGG CGAAGTGCGG CACATGATGG TGTCCTGCGT TCCGGACATG
GACGGAGCGC AGGCCCAGGG CATCTTCGTG CAGATCGACG ACCTCACCGA ACGCAAGCGC
ATGGAAGACC TGCTCTTCGA GGAGAAGGAA CTGGTCCGCC TCACGCTGCA GTCCATCGGC
GACGCCGTGC TGTGCACGGA CGCCTCGGGC CACGTGACCT ACATCAACCC CGTGGCAGAG
AAGATAACGG GCTGGCAGGC CTTCCACGCC GCCGGCCGGG ACATCGACGA GGTCGCCCCC
CTCTGCACCG CCAACGGTGT GCCCGCGGAG CATCCGGCCC GCAGCGCGCT GTCGGGCGCG
CAAGCCATAC CGGCCGTGCG CGGCCTCGTG CTGCACTGTC GCGACGGCCG CCGCATCGAC
GTGGAAAACA GCGTCAGCCC CATCACCGAC CGGCACGGAC AGATCACGGG CACCGTGATG
GTGCTGCGGG ACGTGACCGA GGCGACGGCA CTGGCACGCC GCATGGCCCA TCTCGCGCAG
CACGACATGC TGACCGACCT GCCCAACCGG GTGCTGCTGC AGGACCGCGC CCAGCAGGCC
ATCGCCCAGG CACGCCGCGA CGGACACGGC CTCGCCCTGA TGTATATCGA CCTCGACGGC
TTCAAGCAGG TGAACGACAC GCTGGGCCAC GATGCCGGCG ATCTGCTGCT GGTCCAGGTC
GCCCGGCGCT TCTCCCGCTG CGTGCGCCGC TCGGACACCG TCTGCCGCCA GGGCGGCGAC
GAGTTCATCG TGCTCCTGCC CATCGTGGAA CATCCCGAGC AGGCCTGCCA CGTCGCCCGC
AAGATCGTGG CCGCCTGCGA GGCGCCCTTC GACCTGCAGG GCGAGTCGCG GCGGATCGGC
CTCAGCGGCG GTATCGCGAT GTTCCCGCAG CACGGCTCCA GCTTCGAGGA ACTGTGCCGC
AGCGCCGACG TGGCGCTCTA CACCGCCAAG CGTGCAGACA AGCAGCATTT CCGGATGTAT
GCGGGCCCCG AACAGGAGCC CGAGGTCGTT CCGCCTGCAG CGCCTGCCCC CGGACCGGCG
CCCTCCGGCG CGCAGCCGCC ACGCTGA
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| Protein sequence | MSMRLTLHYR MLLLAIALSV GIGALFARAI LTIRDDEWNY ARDANTALAR TLEQSIGRTL
DSFDHSLAGV VEILGRPDLA SLPADVQHAM LFDHSLRSRG LGSVAVIDPG GNVLMSAGAT
PASKMPNLAD RDYFQFHMRE RDRGVYVGRP IRGRVTGEYS LAMSRAFFHQ DGSFGGVVVG
TIRLSYFNEL FGSLGLGPQS LAEIVRTDGT AVSRFPGQIR GVGEPVAHAH LERLLQEREG
HFTESSDEAQ DGIPRLHAFR HVRDYPLVVS VAQSVDSILS QWQRNAVILG SFAALLMAAC
LGLALLFARE LARRQNVAAQ LQRAQHDMRT ILDNLPSLVA YWDRNLRNRF ANQAYLDWLG
MTQEEIQGRP IEELLPAEAC ETARPYLQRA LQGRRQVYER SVPLSSGEVR HMMVSCVPDM
DGAQAQGIFV QIDDLTERKR MEDLLFEEKE LVRLTLQSIG DAVLCTDASG HVTYINPVAE
KITGWQAFHA AGRDIDEVAP LCTANGVPAE HPARSALSGA QAIPAVRGLV LHCRDGRRID
VENSVSPITD RHGQITGTVM VLRDVTEATA LARRMAHLAQ HDMLTDLPNR VLLQDRAQQA
IAQARRDGHG LALMYIDLDG FKQVNDTLGH DAGDLLLVQV ARRFSRCVRR SDTVCRQGGD
EFIVLLPIVE HPEQACHVAR KIVAACEAPF DLQGESRRIG LSGGIAMFPQ HGSSFEELCR
SADVALYTAK RADKQHFRMY AGPEQEPEVV PPAAPAPGPA PSGAQPPR
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