| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3234 |
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| Symbol | |
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| ID | 4668371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3564031 |
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| End bp | 3566130 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639824433 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_971570 |
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| Protein GI | 120611892 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0436708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.309737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCT CCCTCCATGG CGGGGCAGCG GCGCAGGCCG CCGCCTTCGC GCCGCTGCCT
TCGGCCCGCG TCATCGCCGA GTCGCACGAG CGCTCCCGCT CCTTCGGCCT GCACCGGCAT
GCATCCGCCG ACCTCCAGCC CCTGGCGCCC GACGCGCTCG CCTGGGCCGT GGCGCGCAAC
GACGCCCTCT GCGCACATGC GCTCCCCGTC ATGGAAACCC TCTCCGCGCA GATCGCGGGT
ACGCAGAGCA TGGTGCTGCT CACCGACGCC CAGGGCGTGG TGCTGCATGC CCTGGGCGAC
GAAGAATTCC TCGGGCGCGC CCAGCGCGTC GCGCTGCGGC CCGGAGGCAC CTGGTCCGAG
CGCAGCAAGG GCACGAACGC CATCGGCACG GCCCTGGCCC TGGGTGACGC GGTGCAGGTG
AACGGCGACG AGCATTTCCT GGCCGCCAAC CAGTTCCTCA CCTGCTCCTG CGCGCCCATC
TGCGACCCGC TGGGCCAGGT GATCGGCGCG CTCGACGTGA GCGGTGACCG CCACCAGCAG
AGCGCCCACA CGCTGGCCCT GGTGCGCATG TCCGCCCGGA TGGTGGAGAA CCATCTCTTC
GGCAAGGTCT ATGAGGACGC GGTGCGGCTG CGCTTCCATG CGCGGCCGGA GTTCCTGGGG
ACGCTGGTGG AGGGGTTGGC CGCGTTCACG CCGGAGGGCC GTTTCCTCGC GGCCAACCGC
AGCGGGCAGT TCCAGCTCGG CATGTCGGCG AACGCACTGC AGGCGCAGAC TTTCCCGTCG
CTCTTCGGCA TGCCGATGAG CGCGCTGCTG GCCCATGCGC GCGGCGCCAT GCCCAGGCCG
CTGCAGCTCG CGCTGCCGGG CGGGGTGGTG GTCAACGCGA TGGTGGAGTT CCGCCCGAAA
GGGGCCGCGG CCCTCGGCTG GACGGGTCAG GGGAGCGACG AGGACACCCC GGTGCCCGGG
CCCGTGGCAC CAGCTTCCGC CACGGCAAGG GCGGCCCGCA GGCCCATCGC CCCGGTACCG
GCCGGCGGTC CGCGGCTGTC CGGCCTGCGC TACCTGGACA CGGGCGATGC GCAGCTGGCG
CAGGTGATCG ACCGCGTCTC GCGCGTGCTG GGCAGCGACG TGCCCATGCT CATCCTCGGC
GAGACCGGCA CGGGCAAGGA ACTGCTGGCC CGCGCCATCC ACCAGGACGG CCCGCGCGCG
CGCGGGCCCT TCGTGGCGGT GAACTGCGCA TCGATCCCGG AAACGCTGAT CGAGGCCGAA
CTGTTCGGCT ACGAAGAGGG CGCCTTCACC GGCGCGCGCC GCAGGGGCAG CGTGGGCAAG
ATCGCCCAGG CGCACGGCGG CACGCTGTTC CTGGACGAGA TCGGCGACAT GCCCCTGGCC
ATGCAGGCCC GGCTGCTGCG CGTGCTGCAG GAGCGCACCG TGGCGCCGCT GGGGTCGGCG
CGACAGATCC CGGTGGACGT GCACGTGCTG TGCGCCACCC ACCGCAACCT GCGCGACATG
ATGGTCCGGG GGCTGTTCCG CGATGACCTG TACTACCGGC TCAACGGGCT GGTGGTGCGC
CTGCCGGCCC TGCGCGAGCG TTCGGACCTG CGTGTCATCG TGCAGCGCCT CCTGCAGGCG
CAGGACCGCG AGCAGGCTGC CGAAGGCTCC ACGCCGGGGT GGCAGCGACC GCGCCGGACG
GTGCCCCTGC AGGTTGCGTC CCGGGCCATG GATCTGTTCC TGCGGCACCG CTGGCCGGGC
AATCTGCGCC AGCTCTCGAA TGCGCTGCGC ACGGCGGCGC TGATGGCCGG CGATGCGGAC
GAGATCGATA TCGGGCACCT GCCGGAGGAT CTGTTCGACG AGGGCCTTCC CACAGCCGGC
GATGCCGTGC CCGGGGCATC GGCGCGGGAC GCCGAGCCGT CCCCGTCCGT CCGGAGTGCT
GCGCACCGGC CCGCACCGGC TGCGGTGCGC TCATGGGACG AGACCGTGGA AGATGCGCTG
CGCCATGCGC TGTCGGTGCA TGGCGGCAAC GTGTCCGCCG TGGCGCGGGC GTTGGGGGTG
TCGCGCAATA CGGTGTACCG GCGGTTGAAA TCCATGGACG GAACGGCCGC CCATCATTGA
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| Protein sequence | MQSSLHGGAA AQAAAFAPLP SARVIAESHE RSRSFGLHRH ASADLQPLAP DALAWAVARN
DALCAHALPV METLSAQIAG TQSMVLLTDA QGVVLHALGD EEFLGRAQRV ALRPGGTWSE
RSKGTNAIGT ALALGDAVQV NGDEHFLAAN QFLTCSCAPI CDPLGQVIGA LDVSGDRHQQ
SAHTLALVRM SARMVENHLF GKVYEDAVRL RFHARPEFLG TLVEGLAAFT PEGRFLAANR
SGQFQLGMSA NALQAQTFPS LFGMPMSALL AHARGAMPRP LQLALPGGVV VNAMVEFRPK
GAAALGWTGQ GSDEDTPVPG PVAPASATAR AARRPIAPVP AGGPRLSGLR YLDTGDAQLA
QVIDRVSRVL GSDVPMLILG ETGTGKELLA RAIHQDGPRA RGPFVAVNCA SIPETLIEAE
LFGYEEGAFT GARRRGSVGK IAQAHGGTLF LDEIGDMPLA MQARLLRVLQ ERTVAPLGSA
RQIPVDVHVL CATHRNLRDM MVRGLFRDDL YYRLNGLVVR LPALRERSDL RVIVQRLLQA
QDREQAAEGS TPGWQRPRRT VPLQVASRAM DLFLRHRWPG NLRQLSNALR TAALMAGDAD
EIDIGHLPED LFDEGLPTAG DAVPGASARD AEPSPSVRSA AHRPAPAAVR SWDETVEDAL
RHALSVHGGN VSAVARALGV SRNTVYRRLK SMDGTAAHH
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