| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3215 |
|---|
| Symbol | |
|---|
| ID | 4667901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3546460 |
|---|
| End bp | 3547245 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639824414 |
|---|
| Product | glutathione S-transferase domain-containing protein |
|---|
| Protein accession | YP_971551 |
|---|
| Protein GI | 120611873 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.969871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGGCT TTCGCGCACG GCCCCTGCGG CGCGCGGGCA AGCCGGCTAC AGTGGCCCGC
TACCCGTTCC CTGGAGCCCA CAGCATGATC GACCTGCACT ACTGGACCAC CCCCAACGGC
CACAAGATCA CCATGTTCCT GGAGGAGGCC GGCCTGCCCT ACCGCGTGCT GCCCGTGAAC
ATCGGCCGCG GCGAGCAGTT CCGGCCCGGG TTCCTGCGCA TCGCGCCCAA CAACCGCATC
CCGGCCCTCG TGGACCACGA TCCGGCCGGC GGCGGCGAGC CGGTTTCCGT CTTCGAATCC
GGCGCCATCC TGCTCTACCT GGCCGACAAG ACCGGCCGGT TCATTCCGCA GGACCTGCGC
GGCCGCACCG AGGCGCTGCA GTGGCTGTTC TGGCAGATGG GCGGCCTGGG CCCGATGGCA
GGGCAGAACC ACCATTTCAC GCAGTACGCG CCGGAGCCGG TGCCCTACGC CATCGACCGC
TACGTGAAGG AGACCGCGCG GCTCTACGGC GTGCTCGACA AGCACCTTTC GGACGGCCGC
GAATACATCG CCGGCAGCTA TTCGATCGCC GACATGGCCT GCTACCCCTG GATCGTGCCG
CACGAGAAGC AGCGCCAGGA CCTGAAGGAT TTCCCGCACC TCGCGCGCTG GTTCGGGCGC
ATCGCCGAGC GCCCCGCCAC CGTGCGGGCC TACGACGTCG CGAAGTCGGT CAACACCGCG
CCCACGGTGG ACGAGGACGC CAGGAAGATC CTGTTCGGGC AGGACGCCGG CACGGTGCGA
CGCTGA
|
|---|
| Protein sequence | MRGFRARPLR RAGKPATVAR YPFPGAHSMI DLHYWTTPNG HKITMFLEEA GLPYRVLPVN
IGRGEQFRPG FLRIAPNNRI PALVDHDPAG GGEPVSVFES GAILLYLADK TGRFIPQDLR
GRTEALQWLF WQMGGLGPMA GQNHHFTQYA PEPVPYAIDR YVKETARLYG VLDKHLSDGR
EYIAGSYSIA DMACYPWIVP HEKQRQDLKD FPHLARWFGR IAERPATVRA YDVAKSVNTA
PTVDEDARKI LFGQDAGTVR R
|
|---|
| |