Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3208 |
Symbol | |
ID | 4669820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3537373 |
End bp | 3538143 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639824407 |
Product | IclR family transcriptional regulator |
Protein accession | YP_971544 |
Protein GI | 120611866 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.129719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGGC ATTGCCTTCC CGCCATGAAA GCTTCCCGAA CCGAATCCCG GCCCACGCCT TCCGCCGAGC CGCCGCGTCC ACCCTCCGGG GTGCTGGAAC GCGGCATCGC CATCCTCGAG TGTTTCGACG AAGACAGCCT GCGTCTGCCG CTGCGCGACG TGGCGGAGCG GACCGGGCTG GACAAGGCCA CCGCGCTGCG GCTCCTCGGC GTGCTGGTGC GCTCCCGCAT GGTCCACCGC TTCGACAACG GCGACTACGC GCCCGGGCCC GCCCTGCTAC ACATGGGCAT GCTGTACCGG CAGACCTTCG ACATCGGCGC GCGCCTGCAG CCGGCGCTGC AGGCCGTGAT GCAGGAAACG GGCGAGACCG TGGCCTTCTA CGTGCGCGAC GGCGACGAGC GCGTCTGCCT GTACCGCGAG AACAGTCGCA ACGAGGTGCG CCACCATGTG GAGGTGGGCG CGCGCATTCC GCTCACCGCG GGCGGTTCCT CATCCCACGT GCTGCGCCAT TTCACGGGCA GCGAAACGCC GCAGGCCGAG GCCATCGCCC GCGACGGCTT CGCCATGACG CGGGAGGAGC GCGTGCCCCA GATCGCCTCC GTGGCCGTGC CGGTCTTCGA CAGCGACGGC AGCTTCCTGG GTGCCGTGGT CGTGATCGGC ATCGCGCCCC GGCAGAGCGC CACGGCCCAG CGGCGCGCCG TGCAGGTGGT GCGCAGCGCG CTGCAGGCCC AGGGCTTCAG CAGCCGGCCT CCGCGCGGCT GGCAGGGCTA G
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Protein sequence | MHGHCLPAMK ASRTESRPTP SAEPPRPPSG VLERGIAILE CFDEDSLRLP LRDVAERTGL DKATALRLLG VLVRSRMVHR FDNGDYAPGP ALLHMGMLYR QTFDIGARLQ PALQAVMQET GETVAFYVRD GDERVCLYRE NSRNEVRHHV EVGARIPLTA GGSSSHVLRH FTGSETPQAE AIARDGFAMT REERVPQIAS VAVPVFDSDG SFLGAVVVIG IAPRQSATAQ RRAVQVVRSA LQAQGFSSRP PRGWQG
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