Gene Aave_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3208 
Symbol 
ID4669820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3537373 
End bp3538143 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID639824407 
ProductIclR family transcriptional regulator 
Protein accessionYP_971544 
Protein GI120611866 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.129719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGGC ATTGCCTTCC CGCCATGAAA GCTTCCCGAA CCGAATCCCG GCCCACGCCT 
TCCGCCGAGC CGCCGCGTCC ACCCTCCGGG GTGCTGGAAC GCGGCATCGC CATCCTCGAG
TGTTTCGACG AAGACAGCCT GCGTCTGCCG CTGCGCGACG TGGCGGAGCG GACCGGGCTG
GACAAGGCCA CCGCGCTGCG GCTCCTCGGC GTGCTGGTGC GCTCCCGCAT GGTCCACCGC
TTCGACAACG GCGACTACGC GCCCGGGCCC GCCCTGCTAC ACATGGGCAT GCTGTACCGG
CAGACCTTCG ACATCGGCGC GCGCCTGCAG CCGGCGCTGC AGGCCGTGAT GCAGGAAACG
GGCGAGACCG TGGCCTTCTA CGTGCGCGAC GGCGACGAGC GCGTCTGCCT GTACCGCGAG
AACAGTCGCA ACGAGGTGCG CCACCATGTG GAGGTGGGCG CGCGCATTCC GCTCACCGCG
GGCGGTTCCT CATCCCACGT GCTGCGCCAT TTCACGGGCA GCGAAACGCC GCAGGCCGAG
GCCATCGCCC GCGACGGCTT CGCCATGACG CGGGAGGAGC GCGTGCCCCA GATCGCCTCC
GTGGCCGTGC CGGTCTTCGA CAGCGACGGC AGCTTCCTGG GTGCCGTGGT CGTGATCGGC
ATCGCGCCCC GGCAGAGCGC CACGGCCCAG CGGCGCGCCG TGCAGGTGGT GCGCAGCGCG
CTGCAGGCCC AGGGCTTCAG CAGCCGGCCT CCGCGCGGCT GGCAGGGCTA G
 
Protein sequence
MHGHCLPAMK ASRTESRPTP SAEPPRPPSG VLERGIAILE CFDEDSLRLP LRDVAERTGL 
DKATALRLLG VLVRSRMVHR FDNGDYAPGP ALLHMGMLYR QTFDIGARLQ PALQAVMQET
GETVAFYVRD GDERVCLYRE NSRNEVRHHV EVGARIPLTA GGSSSHVLRH FTGSETPQAE
AIARDGFAMT REERVPQIAS VAVPVFDSDG SFLGAVVVIG IAPRQSATAQ RRAVQVVRSA
LQAQGFSSRP PRGWQG