| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3205 |
|---|
| Symbol | |
|---|
| ID | 4666825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3533988 |
|---|
| End bp | 3534860 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639824404 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_971541 |
|---|
| Protein GI | 120611863 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.568485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTT CCGTCCAGCA TTTTTTCGAC AGCGCCACCT CCACGTTCTC GTACGTGGTG
GACGACGGCG CCGGCCATTG CGCGGTCATC GATCCCGTCA TGGGGTTCGA CCAGAAGGCA
GGGCGCACCG ACCCCGGGCC CGCCGAGGCC CTGGCCGCCC ACATCGCGGC CAAGGGGTTG
CGGGTGGACT GGCTGCTCGA AACCCACGCC CATGCGGACC ATCTCTCGGC GGCGCCCTGG
CTCCAGAAGC GCTTCGGCGG GCTGGTGGGC ATCGGCGCCG GAATCACGCA GGTCCAGCGG
GAATTCCGCG GCATCTTCAA CGCGACCGAC CTGCCCACCG ACGGCTCGCA GTTCGGCCAC
CTGTTCGCCG ATGGCGAGAC GTTTTCCATC GGGCGCCTGC AGGCCGCCGC CCTGCACGTG
CCCGGCCACA CCCCCGCCGA CGTCGCCTAC CGGATCACCG ATCCCGCCGC GGGGCCCGAT
GCGGTCTTCG TGGGGGATAC GCTGTTCATG CCCGACGTCG GCACCGCGCG CTGCGACTTT
CCCGGCGGCG ATGCCCGCAC GCTGTTCCAG TCGGTGCGGC GCATCCTGGC GCTGCCGGCC
GAGACGCTGC TCTATCTCTG CCACGACTAT CCGCCCGCGG GGCGGCAGGC CCAGTGCCGC
ACGACCGTCG CGCGGCAGCG GGCATCGAAC ATCCATGTGC GCGACGGCAT CGCCGCGCAT
GACTTCGTCG CGATGCGCAC CGAGCGCGAT GCGACGCTGA ACCTTCCGGC GCTCATGCTG
CCCGCGGTCC AGGTGAACAT CCGGGCGGGC CATATGCCCC CCCCCCGAAG CGAACGGCAC
GGCCTACCTG AAGATCCGGT CAACCTGCTC TGA
|
|---|
| Protein sequence | MPLSVQHFFD SATSTFSYVV DDGAGHCAVI DPVMGFDQKA GRTDPGPAEA LAAHIAAKGL
RVDWLLETHA HADHLSAAPW LQKRFGGLVG IGAGITQVQR EFRGIFNATD LPTDGSQFGH
LFADGETFSI GRLQAAALHV PGHTPADVAY RITDPAAGPD AVFVGDTLFM PDVGTARCDF
PGGDARTLFQ SVRRILALPA ETLLYLCHDY PPAGRQAQCR TTVARQRASN IHVRDGIAAH
DFVAMRTERD ATLNLPALML PAVQVNIRAG HMPPPRSERH GLPEDPVNLL
|
|---|
| |