Gene Aave_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3178 
Symbol 
ID4665111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3507123 
End bp3507734 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID639824378 
ProductMarR family transcriptional regulator 
Protein accessionYP_971515 
Protein GI120611837 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0352052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.846019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC GCAAGCAGAG CTTCCGCCTC GTGCAGGCAC TGGGCGACGA GCACATCGGC 
CTGGAGGCGC GCGCCCAGGC CGGCGACCAC CTGGACATCA AGATCTGGCT GCGGCTGCTG
GCGTGCAGCA CGCAGATCGA GCAGCAGGTG CGGCAGTGGC TGCGCACCCG TTTCGATACG
ACGCTGCCGC GCTTCGACTA CCTCGCGCAG CTGGACCGGC ATCCCGGCGG GCTGCGCATG
AACGTGCTTT CGCGCTACCT CATGGTCACG GGCGGCAACG TCACGGGACT GACGGACCAG
CTCGTCAAGG AAGGGCTGGT CGAACGCACC GAAGACCCGG AAGACCGCCG CTCCTGGCGC
GTGCGCCTGA CGGACAAGGG CCGGACCGAC TTCGCGGCCA TGGCGGCGGA GCACGAGCGC
TGGCTCTCCG GCCTGTTCGA CGGCCTGCCC GCGGCCAGCA AGGACGCGCT CTACGAACAC
CTCGGCCTGC TGCGCGTGCA CCTCGTGCAG CGGCAGGTCG CGGCCGGCGC GGACCCGGCC
GCCCAGGCCC CGGGCGAGGC GGCCGGCCTT CCCGACACCC CATCGAAACG CAGCAGGAAA
TCCCTCCCAT GA
 
Protein sequence
MATRKQSFRL VQALGDEHIG LEARAQAGDH LDIKIWLRLL ACSTQIEQQV RQWLRTRFDT 
TLPRFDYLAQ LDRHPGGLRM NVLSRYLMVT GGNVTGLTDQ LVKEGLVERT EDPEDRRSWR
VRLTDKGRTD FAAMAAEHER WLSGLFDGLP AASKDALYEH LGLLRVHLVQ RQVAAGADPA
AQAPGEAAGL PDTPSKRSRK SLP