Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3178 |
Symbol | |
ID | 4665111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3507123 |
End bp | 3507734 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639824378 |
Product | MarR family transcriptional regulator |
Protein accession | YP_971515 |
Protein GI | 120611837 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0352052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.846019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCC GCAAGCAGAG CTTCCGCCTC GTGCAGGCAC TGGGCGACGA GCACATCGGC CTGGAGGCGC GCGCCCAGGC CGGCGACCAC CTGGACATCA AGATCTGGCT GCGGCTGCTG GCGTGCAGCA CGCAGATCGA GCAGCAGGTG CGGCAGTGGC TGCGCACCCG TTTCGATACG ACGCTGCCGC GCTTCGACTA CCTCGCGCAG CTGGACCGGC ATCCCGGCGG GCTGCGCATG AACGTGCTTT CGCGCTACCT CATGGTCACG GGCGGCAACG TCACGGGACT GACGGACCAG CTCGTCAAGG AAGGGCTGGT CGAACGCACC GAAGACCCGG AAGACCGCCG CTCCTGGCGC GTGCGCCTGA CGGACAAGGG CCGGACCGAC TTCGCGGCCA TGGCGGCGGA GCACGAGCGC TGGCTCTCCG GCCTGTTCGA CGGCCTGCCC GCGGCCAGCA AGGACGCGCT CTACGAACAC CTCGGCCTGC TGCGCGTGCA CCTCGTGCAG CGGCAGGTCG CGGCCGGCGC GGACCCGGCC GCCCAGGCCC CGGGCGAGGC GGCCGGCCTT CCCGACACCC CATCGAAACG CAGCAGGAAA TCCCTCCCAT GA
|
Protein sequence | MATRKQSFRL VQALGDEHIG LEARAQAGDH LDIKIWLRLL ACSTQIEQQV RQWLRTRFDT TLPRFDYLAQ LDRHPGGLRM NVLSRYLMVT GGNVTGLTDQ LVKEGLVERT EDPEDRRSWR VRLTDKGRTD FAAMAAEHER WLSGLFDGLP AASKDALYEH LGLLRVHLVQ RQVAAGADPA AQAPGEAAGL PDTPSKRSRK SLP
|
| |