Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3174 |
Symbol | |
ID | 4666484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3502126 |
End bp | 3503325 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824374 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_971511 |
Protein GI | 120611833 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0541097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.740982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTCC TCCCGTCCCG CGAGCACCGT TCCTCCACAT CCGCCGCCCT CTGCGCGGCC GTCGCCCTGC TGGCCGGTGG CGCCCAGGCC GCGGACAAGG TCAAGGTCGG CCTGCTGACC ACGCTGTCGG GCCCCGGGTC GGGCCTCGGG ATCGACATCC GCGATGGCTT CCAGCTCGCG GTGAAGCAGG GCGCGGGCAG GCTCGGCGGC CTGCCGGCCG AAGTGACCGT GGCGGACGAC CAGCAGAGCC CCGACGCGGC CAAGCAGACG GCCGACCGGC TGGTCAAGCG CGAGCGCGTG GATTTCATGA CCGGCATCGT GTTCTCCAAC GTGATGCTGG CCGTCGGGCA GCCGGTGTTC CAGTCGCGCA CCTTCTACAT CAGCGCCAAC GCCGGGCCGT CGCAGTACGC GGGCGCGCAA TGCAACCCGT ACTTCTTCAG CGCTTCCTAC CAGAACGACA ACATGCACGA GGCCGTGGGC AAGACCGTGC AGGACCGCGG CTTCAAGAAG GTGGCGCTGC TCGCGCCCAA CTATCCGGCG GGCAAGGACG CGCTGGCCGG CTTCAAGCGT TTCTACAAGG GCGAGGTGGT CATGGAGGCC TACACGCCGC TGAGCCAGCT CGACTACGGC GCGGAGCTGT CCAAGATCCG CGCCTCGGGC GCCGACGCGG TCTTCGTGTT CCTGCCGGGC GGCCTGGGCG TGAACTTCGT CAAGCAGTTC ACCGGTGCCG GCCTGGGCAA GGAGATGAAG CTCTTCGCCC CGGGCTTCTC GGCCGACGAG GACGTGATCC GCGCGGTGGG CGATGCCATG GTGGGCATCT TCAACAGCTC GCAGTGGGCC CACGACATGG ACAACGCCGC CAACAAGCGC TTCGTGGCCG ACTTCCAGAA GGAATACGGC CGCCTGCCGA CGCTGTACGC GGCGCAGGGC TACGACGCGG CCCGGCTCAT CGACGGCGCC GTGCGCCGCG TGGGCGGCAA GCTGGAGGAC AAGGCCGCGC TGCGCAAGGC GCTGGAGGCC GCGCCGTTCG AGTCCGTGCG CGGGCCGTTC CGCTTCAACA CCAACCACTA CCCGGTGCAG GACTACTACC TGCGCGAAGT GGTGAAGGAC GCGCAGGGCC GCATCACCAA CAAGACCGTC GGCCGCGTGT TCGAGGCGCA TGCCGATGCC TACGCCGGCG AATGCCGCAT GCCCTCCTGA
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Protein sequence | MPFLPSREHR SSTSAALCAA VALLAGGAQA ADKVKVGLLT TLSGPGSGLG IDIRDGFQLA VKQGAGRLGG LPAEVTVADD QQSPDAAKQT ADRLVKRERV DFMTGIVFSN VMLAVGQPVF QSRTFYISAN AGPSQYAGAQ CNPYFFSASY QNDNMHEAVG KTVQDRGFKK VALLAPNYPA GKDALAGFKR FYKGEVVMEA YTPLSQLDYG AELSKIRASG ADAVFVFLPG GLGVNFVKQF TGAGLGKEMK LFAPGFSADE DVIRAVGDAM VGIFNSSQWA HDMDNAANKR FVADFQKEYG RLPTLYAAQG YDAARLIDGA VRRVGGKLED KAALRKALEA APFESVRGPF RFNTNHYPVQ DYYLREVVKD AQGRITNKTV GRVFEAHADA YAGECRMPS
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