Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3166 |
Symbol | |
ID | 4666114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3495236 |
End bp | 3496177 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639824366 |
Product | transcriptional regulator CysB-like protein |
Protein accession | YP_971503 |
Protein GI | 120611825 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0200207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGC ACCAGTTCCG CTTCGTCCAG GAAGCCGCCC GCCGCAACCT CAACCTGACG GAGGCCGCCA AGGCGCTCCA CACCTCGCAG CCCGGGGTGT CCAAGGCCAT CATCGAACTG GAAGACGAGC TGGGCGTGGA CATCTTCGCG CGCCACGGCA AGCGGCTCAA GCGCATCACC GAGCCGGGGC AGCACGTGCT CAAGAGCATC GAGCTGATCA TGCGCGAGGT GGGCAACCTC AAGCGCATCG GCGAGCAGTT CAGCGCGCAG GACAGCGGCA CGCTGAGCAT CGCCACCACC CACACGCAGG CGCGCTACGT GCTGCCGGTG CCGGTGGCGA AGCTGCGCGA GGCCTATCCC AAGGTGAACG TGAGCCTGCA CCAGGCCACG CCGCACGAGG TGGCGCGCAT GGTGATCGAC GAGGTGGCGG AAATCGGCAT GGCCACCGAA TCGCTCGCGG ACTACCCGGA CCTCGTCACC CTGCCCTGCT ACGAATGGCA GCACGTGCTG GTGATGCCCT CGGGCCATCC GCTGGCGCAG CAGGAGCGCA TCAGCGTGGA CGACATCGCC CACGAAGCCC TCATCACCTA CCACCCCTCG TTCACGGGGC GCGGCAAGAT CGACCAGGCC TTCGCCGCGC GCAAGCTGCA GCCGCGCATC GTGCTGGAGG CCATCGACTC CGACGTGATC AAGACCTACG TGCGCCTGGG CCTGGGCGTG GGCATCGTGG CCGAGATGGC CATGCGCGAC GATCCGCTGG GTGACCTGGT GGTGCGCCCC GTGGGCCACC TGTTCGGACA GAGCGTGGCG CGCGTGGCCT TCAAGCGCGG CGCCTACCTG CGCAACTTCG TCTATAAATT CGCGGAACTG CTCAGCGACC GGCTGAACCG CGAACTCGTG GCCCGCGCGA TGACCGGGCA CGTGAACGAC TACGAGCTTT GA
|
Protein sequence | MNLHQFRFVQ EAARRNLNLT EAAKALHTSQ PGVSKAIIEL EDELGVDIFA RHGKRLKRIT EPGQHVLKSI ELIMREVGNL KRIGEQFSAQ DSGTLSIATT HTQARYVLPV PVAKLREAYP KVNVSLHQAT PHEVARMVID EVAEIGMATE SLADYPDLVT LPCYEWQHVL VMPSGHPLAQ QERISVDDIA HEALITYHPS FTGRGKIDQA FAARKLQPRI VLEAIDSDVI KTYVRLGLGV GIVAEMAMRD DPLGDLVVRP VGHLFGQSVA RVAFKRGAYL RNFVYKFAEL LSDRLNRELV ARAMTGHVND YEL
|
| |