Gene Aave_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3165 
Symbol 
ID4666606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3494716 
End bp3495120 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content74% 
IMG OID639824365 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_971502 
Protein GI120611824 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.232194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACG ACACATCCCG GGCCGAAGCC CCCCGCGGCG TGGTGCTGTT CGCCCATGGC 
TCGCGCGACC CGCTCTGGCG CGCACCGATC GAGGCCGTGG AGGCCCGCAT GCGGCAGCAG
GCGCCCGGGC TGGAGGTGCG CTGCGCCTAC CTGGAACTGG CCGAACCCGA CCTGCCCACG
GCGGTGCGCG AACTGGCGGC GCGCGGCGTG CGCCGGCTCA CCGTGGTGCC GATGTTCCTG
GGCACCGGCA AGCATGCGCG CGAGGATCTG CCGCAACTGG TGCAGGCGCT GCGTGCAGAA
CACCCGGAAA TGGCCGTCGC CGTGCAGGGC GCCATCGGCG AGGATGCGCG CATGACGGCG
CTGATGGCGG AGATCGCATC GGCCGAGCCC CACGCGGGGC CTTGA
 
Protein sequence
MAHDTSRAEA PRGVVLFAHG SRDPLWRAPI EAVEARMRQQ APGLEVRCAY LELAEPDLPT 
AVRELAARGV RRLTVVPMFL GTGKHAREDL PQLVQALRAE HPEMAVAVQG AIGEDARMTA
LMAEIASAEP HAGP