Gene Aave_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3161 
Symbol 
ID4666927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3490437 
End bp3490871 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content71% 
IMG OID639824361 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_971498 
Protein GI120611820 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA TCGCCTTCCA TTTCAATGCG CCGGACAAGC TCGCCTATGC GTGCCGCTTC 
GCGCGCAAGG CGGTGCGCAG CGATGCGCTG CTGGTCATCA CGGGACCTTC CGCCGTGCTC
GATGCGGTGG ACCGCGCCCT CTGGGCGCTG GGCCCGCAGG ATTTCGTCGC CCACTGCCGC
CAGGAGGACG AGGCCGATCT GCGCGAGGCC TCGCCCGTGC TGCTGGCGAC CGATCCCCGC
GCCGCCACCC ATGCGCAGGT GCTGCTGAAC CTCGGCCCCA CGGTGCCCGC GGGTTTCGAG
CGCTTCGGCC GGCTGGTGGA AGTGGTGAGT TCCACCGACG AATCCGACCG CGCCGGAGCG
CGCGAGCGCT GGCGGCACTA CGCCCAGCGC GGCTACGCCA TCGTGCGCCA CGACCTGGTG
CTGAAGGGGG GCTGA
 
Protein sequence
MTEIAFHFNA PDKLAYACRF ARKAVRSDAL LVITGPSAVL DAVDRALWAL GPQDFVAHCR 
QEDEADLREA SPVLLATDPR AATHAQVLLN LGPTVPAGFE RFGRLVEVVS STDESDRAGA
RERWRHYAQR GYAIVRHDLV LKGG