Gene Aave_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3159 
Symbol 
ID4667403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3488612 
End bp3489742 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID639824359 
Productextracellular ligand-binding receptor 
Protein accessionYP_971496 
Protein GI120611818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGA AGTTGAAACT GACCGTGGTT GCCGCTATCG CGGCGTTTGC CGGTGTCGCC 
TCTGCACAAG AACAGGTGGT GAAGATCGGC CACGTGGGAC CGGTTTCCGG CCCCCAGGCT
CACTACGGCA AGGACAACGA AAACGGCGCC CGCATGGCCG TCGAGGAACT GAATGCCCAG
GGGGTCACGA TCGGCGGCAA GAAGATCAAG TTCGAATTGC AGGCCGAAGA CGACGCTGCA
GATCCGAAGC AGGGCACGGC CGCTGCCCAG AAGCTGTGCG ACGCCAAGGT CGCCGGCGTG
GTGGGCCACT TGAACTCCGG CACTACGATC CCCGCATCGA AGGTGTACAA CGACTGCGGC
ATCCCGCACG TCACCGGCGC CGCAACCAAC CCCAACCTGA CCAAGCCCGG CTACAAGACC
ACGTTCCGCA TCATCGCGAA CGACAACGCC CTGGGCGCCG GCCTGGCCGC CTACGCCGCC
GACACGCTGA AGCTCAAGAC CGTGGCCATC ATCGACGACC GCACGGCCTA CGGCCAGGGC
GTGGCCGACG TGTTCAAGAA GACCGCCGCC GCGAAGGGCA TCAAGGTGGT GGACGAGCAG
TTCACGACCG ACAAGGCCAC CGACTTCATG GCCATCCTGA CGGCCATCAA GTCCAAGAAC
CCCGACGCCA TCTTCTACGG CGGCATGGAC CCGCAGGCCG GCCCCATGCT GCGCCAGATG
GAACAGCTGG GCATGGCCAA CGTGAAGTAC TTCGGCGGCG ACGGCATCTG CACGGCCGAA
GTGGCCAAGC TGGCCGCTGG CGCCAAGACC CTGGCGAACG TGATCTGCGC CGAAGGCGGC
GCTTCCCTGG CCAAGATGCC CGGCGGCACG GCCTGGAAGG CCAAGTACGA TGCCAAGTAC
CCCGGCCAGT TCCAGGTGTA CAGCCCCTAC ACCTACGACG CCACCATGCT GCTGGTCGAT
GCCATGAAGC GTGCCAACTC GTGGGATTCG AAGGTGTACA TCCCCGAGCT GGCCAAGTCC
AACTACAAGG GCGTGACGGC CCAGATCGCC TTCGAGCCCA ATGGCGAACT GAAGAACCCG
GCCATCACCC TGTACACGTA CAAGGACGGC AAGAAGACGC CCCTGAACTG A
 
Protein sequence
MQLKLKLTVV AAIAAFAGVA SAQEQVVKIG HVGPVSGPQA HYGKDNENGA RMAVEELNAQ 
GVTIGGKKIK FELQAEDDAA DPKQGTAAAQ KLCDAKVAGV VGHLNSGTTI PASKVYNDCG
IPHVTGAATN PNLTKPGYKT TFRIIANDNA LGAGLAAYAA DTLKLKTVAI IDDRTAYGQG
VADVFKKTAA AKGIKVVDEQ FTTDKATDFM AILTAIKSKN PDAIFYGGMD PQAGPMLRQM
EQLGMANVKY FGGDGICTAE VAKLAAGAKT LANVICAEGG ASLAKMPGGT AWKAKYDAKY
PGQFQVYSPY TYDATMLLVD AMKRANSWDS KVYIPELAKS NYKGVTAQIA FEPNGELKNP
AITLYTYKDG KKTPLN