| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3147 |
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| Symbol | |
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| ID | 4668439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3472620 |
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| End bp | 3475586 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824348 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_971485 |
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| Protein GI | 120611807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.661802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGT CCACCCTCCC GCCGCTCTCC GCGCTCGAAA ACGCCGCCGA ATTCCAGCCC
CGCCACATCG GCATCGATGC GGCGGACGAG GAGCGCATGC TCTCGGTCAT CGGCGAGGCG
TCGCGTGCGG CGCTGGTGGG CGGCATCGTG CCGGCCTCCA TCGCCCGCAC CGAGCCGATG
CAGCTGCCGC CCGCCACGAC CGAGGCGGCC GCGCTCGCGG AACTCAAGGC GATCGCCTCG
AAGAACCGCG TGCTGCGCAG CTTCATCGGC CAGGGCTATT ACGGCACGCA CACGCCGGGC
GTGATCCTGC GCAACATCCT GGAGAACCCC GCCTGGTACA CCGCCTACAC GCCCTACCAG
GCCGAGATCT CGCAGGGCCG CATGGAGGCG CTGGTCAACT TCCAGACGAT GGTGTGCGAC
CTCACGGGCA TGCCCATCGC CAACGCGTCG ATGCTGGACG AGGCCACGGC CGCGGCCGAG
GCCATGACGC TCGCCAAGCG CTCCGTCAAG TCCAAGAGCC AGACGCTCGT CGTCTCGGGC
GACACGCATC CGCAGACCAT CGAGGTGATC CGCACGCGCG CCGAGCCGCT GGGCATCAGC
GTGGTGATCG CGAACTCCGA AGCCGAGTGG AACGCCGCGC TCGAGGGCGA TTTCTTCGCC
GCCGTCATCC AGTACCCGGC CAGCAGCGGC TGGCTCGCCG ACTGGAGCGC CGACGTGAAG
AAGATCCATG CGAAGCAGGC CGCCGCCATC GTGTGCGCCG ACCTGCTGGC GCTCACGCTG
CTCGTGCCGC CCGGCGAATG GGGCGCGGAC ATCGTCGTGG GCAGCACGCA GCGCTTCGGC
ATGCCGATGG GCGCCGGCGG CCCGCACGCC GCCTTCATGG CCTGCCGCGA CGACTTCAAG
CGCTCGCTGC CCGGCCGCCT CGTGGGCGTG AGCGTGGACG TGCACGGCCA GCCGGCCTAC
CGCCTGGCGC TGCAGACGCG CGAGCAGCAC ATCCGCCGCG AGAAGGCCAC CTCCAACATC
TGCACGGCGC AGGTGCTGCC GGCGGTGATC GCCAGCATGT ACGCCGTGTA CCACGGCCCC
GAAGGCCTCA AGCGCATCGC CCAGCGCGTG GCGAGCTTCA CGGCCATCCT GGCCAAGGGC
CTCGTGGCGC TCGGCCATAC CGCGCACCAC CACGAGTCGG CCTTCGACAC CCTGTGCCTG
CACACGAAAG AGCAGACCGG CGCGCTGCTG GCCCGTGCCG TGGAGCGCGG CGCCAACCTG
CGCGTGGCCT GGAACGACTA CCTCTGCATC TCGCTCGACG AAACCACGAC GCGGGCCGAC
ATCGAACTGC TCTGGTCGAT CTTCGCCGCC GACGGGCAGG CCCTGCCGCG CATCGAGGAT
TTCGCGGACG GCGTGAACCC GCTGATCCCC GCCGAACTGC GCCGCACGAG CGCCTTCCTG
ACGCACCCGG TGTTCAACAC CCACCACTCC GAGACCGGCA TGCTGCGCTA CATCCGCCAG
CTGTCCGACA AGGACCTCGC GCTCGACCGC AGCATGATCC CGCTGGGCAG CTGCACCATG
AAGCTCAACG CCACGAGCGA GATGATCCCG ATCACCTGGC CGGAATTCGC GCAGGTGCAC
CCGTTCGCGC CCGCCGACCA GCTGGAGGGC TACCGCCAGC TCGACGAGCA GTTGCGCGCC
TGGCTCTGCC AGGCCACGGG CTATGCCGGC ATCAGCCTGC AGCCCAATGC CGGATCGCAG
GGCGAGTACG CGGGCCTGCT GGCCATCCGC GCCTACCATG CGGCGCAGGG CCAGGGCCAC
CGCAACATCT GCCTGATCCC GAGCAGCGCC CACGGCACCA ACCCGGCCAG CGCGCAGATG
GTGGGCATGC AGGTGGTGGT CACCGCCTGC GACGCCAGCG GCAACGTCGA TATGGACGAC
CTGCGCGCCA AGTGCGAGCA GCATGCCGAC AAGCTCGCCT GCGTGATGAT CACCTACCCC
AGCACGCACG GCGTGTTCGA GACGCAGGTG AAGGAGCTGT GCCAGCTCGT GCACCGCCAC
GGCGGCCGCG TGTACGTGGA CGGCGCCAAC ATGAACGCCA TGGTGGGCGT GGCCGCGCCC
GGCGCCTTCG GCGGCGACGT GAGCCACCTG AACCTGCACA AGACCTTCTG CATCCCGCAC
GGCGGCGGCG GCCCCGGCGT GGGCCCCGTC TGCGTGGTGG AAGACCTCGT GCCCTACCTG
CCGGGCCATG CCACTGCTGG CGCACAAGGT GCGCTTGAGC CAGCGCCGGG CCGTCCCAAG
CTGGCGAAGG CCCCCTCGGG GGGCAGCGAA CCACACGCAG TGGCGAGCGT GGGGGCCGTC
AGTGCCGCCC CGCTCGGCAA TGCCGCGGTG CTCCCGATCA GCTGGATGTA CATCCGCATG
ATGGGCGCGG ACGGCCTGCG CGCCGCCACC GAGACGGCCA TCCTCTCGGC CAACTACATC
AGCGCGCGCC TGAAGGACCA CTACCCCACG CTGTACGCGA GCGCCAACGG CCACGTGGCG
CACGAGTGCA TCCTGGACCT GCGCGGCTTC AAGGAGACCA GCGGCGTGAT GGCCGAGGAC
GTCGCCAAGC GGCTGATCGA CTACGGCTTC CACGCGCCCA CCCTCTCCTT CCCCGTGCCC
AACACGCTCA TGGTGGAGCC CACCGAGAGT GAGACGCTGG CCGAGCTGGA CCGCTTCATC
GACGCGATGA TCGCCATCCG CGGCGAGATC CGGCGCATCG AGCAAGGCGA ATGGCCGCAG
GACGACAACC CGCTCAAGAA CGCGCCCCAC ACCGCGCACA GCCTGCTGGG CGGCGACTGG
ACGCACCCCT ACCCGCGCGA GGCGGCGGCC TATCCGGTCG CGGCGCTGCG GCAGGCCAAG
TACTGGTCGC CCGTGGGCCG GGTGGACAAC GTGTACGGCG ACCGCAACCT GTTCTGCAGC
TGCGTGCCGG TGTCCGACTT CGCCTGA
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| Protein sequence | MPTSTLPPLS ALENAAEFQP RHIGIDAADE ERMLSVIGEA SRAALVGGIV PASIARTEPM
QLPPATTEAA ALAELKAIAS KNRVLRSFIG QGYYGTHTPG VILRNILENP AWYTAYTPYQ
AEISQGRMEA LVNFQTMVCD LTGMPIANAS MLDEATAAAE AMTLAKRSVK SKSQTLVVSG
DTHPQTIEVI RTRAEPLGIS VVIANSEAEW NAALEGDFFA AVIQYPASSG WLADWSADVK
KIHAKQAAAI VCADLLALTL LVPPGEWGAD IVVGSTQRFG MPMGAGGPHA AFMACRDDFK
RSLPGRLVGV SVDVHGQPAY RLALQTREQH IRREKATSNI CTAQVLPAVI ASMYAVYHGP
EGLKRIAQRV ASFTAILAKG LVALGHTAHH HESAFDTLCL HTKEQTGALL ARAVERGANL
RVAWNDYLCI SLDETTTRAD IELLWSIFAA DGQALPRIED FADGVNPLIP AELRRTSAFL
THPVFNTHHS ETGMLRYIRQ LSDKDLALDR SMIPLGSCTM KLNATSEMIP ITWPEFAQVH
PFAPADQLEG YRQLDEQLRA WLCQATGYAG ISLQPNAGSQ GEYAGLLAIR AYHAAQGQGH
RNICLIPSSA HGTNPASAQM VGMQVVVTAC DASGNVDMDD LRAKCEQHAD KLACVMITYP
STHGVFETQV KELCQLVHRH GGRVYVDGAN MNAMVGVAAP GAFGGDVSHL NLHKTFCIPH
GGGGPGVGPV CVVEDLVPYL PGHATAGAQG ALEPAPGRPK LAKAPSGGSE PHAVASVGAV
SAAPLGNAAV LPISWMYIRM MGADGLRAAT ETAILSANYI SARLKDHYPT LYASANGHVA
HECILDLRGF KETSGVMAED VAKRLIDYGF HAPTLSFPVP NTLMVEPTES ETLAELDRFI
DAMIAIRGEI RRIEQGEWPQ DDNPLKNAPH TAHSLLGGDW THPYPREAAA YPVAALRQAK
YWSPVGRVDN VYGDRNLFCS CVPVSDFA
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