| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3145 |
|---|
| Symbol | |
|---|
| ID | 4669498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3470867 |
|---|
| End bp | 3471997 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824346 |
|---|
| Product | glycine cleavage system T protein |
|---|
| Protein accession | YP_971483 |
|---|
| Protein GI | 120611805 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG AATCCGCCGT CCTGCACACC ACCCCCCTGC ACGCGCTGCA CCTCGAACTC
GGGGCCCGCA TGGTGCCCTT CGCCGGCTAC TCCATGCCCG TGCAATACCC CGCCGGCCTG
ATGGCCGAGC ACCTGCACAC GCGGCAGGCC GCCGGTCTGT TCGACGTCTC GCACATGGGC
CAGCTGCGCC TCGTCGGCCC CGATGCCGCC GCGGCCTTCG AGACGCTGAT CCCTGTGGAC
GTGATCGGGC TCGGCATCGG CAAACAGCGC TACGGCCTGC TGCTGAACGA CGAAGGCGGC
ATCATCGACG ACCTGATGTT CGTGAACCGC GGCGACGACC TGTTCGTGAT CGTGAACGGC
GCCTGCAAGG CCGGCGACAT CGCCCACATC CAGGAGCGCA TCGGCGGCCG CTGCGAGGTC
ATCCCCCTGC CCGACCAGGC CCTGCTCGCC CTGCAGGGGC CGCAGGCCGC CGCGGCGCTC
GCGCGCCTGG CACCTGGCAC CGCGTCCCTG GTCTTCATGA CGGGCGGGCG CTTCGAGATC
GCCGGCTGCG ACTGCTATGT GACGCGCAGC GGCTACACCG GCGAGGACGG CTTCGAGATC
TCCGTGCCCG CCGCCCAGGC CGAGGCTCTG GCCCGCGCGC TGCTGGCCCA GCCCGAGGTG
AAGCCCATCG GCCTCGGCGC GCGCAACTCG CTGCGGCTGG AAGCCGGCCT GTGCCTCTAC
GGCAACGACA TCGACACCAC CACCACGCCG CCCGAGGCCG CGCTGAACTG GGCCATCCAG
AAGGTACGGC GCACCGGCGG CGCGCGCGCG GGGGGCTTCC CGGGCGCGGA GAAGGTGCTG
GCGCAGATCG ACGACCCCTC GCTGCTCGCC CGCCGCCGGG TGGGACTGGT GGCGCGCGAG
CGCGTGCCCG TGCGCGAGCA CACCGCCCTG CAGAGCACGG ACGGCGCGGC CATCGGCGAA
GTGACCAGCG GCCTGCTGGG CCCGAGCGTG AACCAGCCCA TCGCCATGGC CTACGTGGCG
CCGGAGTTCG CCGCGGCCGG CACGGTGGTG CACGCGATCG TGCGCGGCAA GGCCGTGCCG
ATGGAGGTCG GCCCCATGCC GTTCCTGCCG CCCCGCTACC ACCGCGGCTG A
|
|---|
| Protein sequence | MSAESAVLHT TPLHALHLEL GARMVPFAGY SMPVQYPAGL MAEHLHTRQA AGLFDVSHMG
QLRLVGPDAA AAFETLIPVD VIGLGIGKQR YGLLLNDEGG IIDDLMFVNR GDDLFVIVNG
ACKAGDIAHI QERIGGRCEV IPLPDQALLA LQGPQAAAAL ARLAPGTASL VFMTGGRFEI
AGCDCYVTRS GYTGEDGFEI SVPAAQAEAL ARALLAQPEV KPIGLGARNS LRLEAGLCLY
GNDIDTTTTP PEAALNWAIQ KVRRTGGARA GGFPGAEKVL AQIDDPSLLA RRRVGLVARE
RVPVREHTAL QSTDGAAIGE VTSGLLGPSV NQPIAMAYVA PEFAAAGTVV HAIVRGKAVP
MEVGPMPFLP PRYHRG
|
|---|
| |