Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3116 |
Symbol | |
ID | 4666501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3440462 |
End bp | 3441031 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824317 |
Product | RDD domain-containing protein |
Protein accession | YP_971454 |
Protein GI | 120611776 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0215825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCA ATAATCCCGG GATGCCCTCC ACCACGCCCC GCGACCTCGA AGCCCCCTCT CCCGAAGCGC CGCCCCACGC CCCCCCTGCC CCGTCCATCC CGCTGCGCAC CCCTTCGCTG CGCAGGCGCA TGGCCTGCTG GGTGTACGAA GGCATCCTGA TGTTCGGGGT CGTTTTCATC TCCGGCTATC TGTTCGATTC GCTGAGCCAG TCACGCCACG CGCTGGATCT CCGGGCGCTG CGCATGGGAT TCCTGTTCGT GGTCTTCGGC ATCTATTTCA CGTGGTTCTG GGCCAAGGGC CAGACGCTGG CCATGAAGAC CTGGCACATC CGGCTGCGGG ACCGCCACGG CGCCCCGGTG ACACAGGCGC GTGCGCTCTG GCGCTACGTG CTGAGCTGGC TGTGGTTCCT GCCCCCGCTC GCCATCGTCG GCCCGCTGGG CCTGGGTGCG GGCGAGATCA CCGTCATCAC CCTGGGCTGG GTGCTCGTCT GGGCGCTCCT CAGCCGCTTC CACCCCCAGC GCCAGTTCTG GCACGATGCC TGGGCCGGCA CCCGGCTGGT GCAGGCCTGA
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Protein sequence | MRRNNPGMPS TTPRDLEAPS PEAPPHAPPA PSIPLRTPSL RRRMACWVYE GILMFGVVFI SGYLFDSLSQ SRHALDLRAL RMGFLFVVFG IYFTWFWAKG QTLAMKTWHI RLRDRHGAPV TQARALWRYV LSWLWFLPPL AIVGPLGLGA GEITVITLGW VLVWALLSRF HPQRQFWHDA WAGTRLVQA
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