| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3113 |
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| Symbol | |
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| ID | 4665701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3438557 |
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| End bp | 3439126 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639824314 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_971451 |
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| Protein GI | 120611773 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0105878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCGACCG AACAGGAACT GTCCGACTTT CTCAAAAGCG TGGAAAAGCG AGCCTTCAAG
CGCTCGCTCT ACCATGTGCG CAATGAGGAA GCGGCTTTGG ACATCGTCCA GGACAGCATG
CTCAAGCTGG CCGAGCACTA CGGGGACAAG CCGCCGTCGG AGCTGCCGAT GCTGTTCCAG
CGCATCCTGT CCAACTGCAC GCTGGACTGG TTCCGCCGCC AGAAGACCCG CAACGCGCTC
TTTTCGAACA TGAGCGACTT CGAGGGACCG GGAGACAATG GCGACGACTT CGATCTGCTG
GAAGCCTATT CGGGTCCCGA GGACACGCAG ACATCGCAGA GCGCGGAAGA TCTCGTCCGC
CGCGCCCAGG TCTTCCGGGA CATCGAATCC GAGATACAGG AGTTGCCCGC CCGTCAACGG
GAGGCTTTTC TGATGCGTTA CTGGGAAGAG ATGGATGTTG CGGAAACAGC CGCGGCCATG
GGCTGCTCGG AAGGCAGCGT CAAGACCCAT TGTTTCCGCG CCATCCAGAC CCTCAGCAAG
GCACTGAAGG CACGAGGAAT CGAACTATGA
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| Protein sequence | MATEQELSDF LKSVEKRAFK RSLYHVRNEE AALDIVQDSM LKLAEHYGDK PPSELPMLFQ
RILSNCTLDW FRRQKTRNAL FSNMSDFEGP GDNGDDFDLL EAYSGPEDTQ TSQSAEDLVR
RAQVFRDIES EIQELPARQR EAFLMRYWEE MDVAETAAAM GCSEGSVKTH CFRAIQTLSK
ALKARGIEL
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