| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3108 |
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| Symbol | |
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| ID | 4665612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3432018 |
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| End bp | 3433556 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639824309 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_971446 |
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| Protein GI | 120611768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.462035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA AACTCATCAT CTTCGACACC ACCCTGCGCG ACGGCGAGCA GTCTCCCGGC
GCCTCGATGA CCCGCGACGA GAAGCTGCGC ATCGCCCGCC AGCTCGAGCG CCTCAGGGTG
GACGTGATCG AGGCCGGCTT CGCCGCCAGC TCGAACGGGG ATTTCGAGGC CGTGCAGGCG
ATCGCCCAGG CCATCAAGGA TTCGACGGTG TGCTCGCTGT CCCGCGCGAA CGACCGCGAC
ATCGCCCGCG CGGCGGAGGC GCTCAAGGAC GCGCAGCGCG CGCGCATCCA CACCTTCATC
GCCACCAGCC CGCTGCACAT GGAAAAGAAG CTTCGCATGA CGCCGGAGCA GGTGCTGGAG
CAGGCGAAGC AGTCCGTGCG TTTCGCGCGC AATCTCGTGG CCGACATCGA ATTCAGCCCG
GAAGACGGCT ACCGCAGCGA GCCCGACTTC CTCTGCCGCG TGCTGGAGGC CGTGATCGCC
GAGGGGGCCA CGACGATCAA CGTGCCGGAC ACGGTGGGCT ATGCCATTCC CGAGCTCTAC
GGCAATTTCA TCAGGAACCT GCGCGAGCGC ATCCCCAACA GCGACAAGGC CGTTTGGTCG
GTGCATTGCC ACAACGACCT CGGCATGGCG GTGGCCAACT CCCTGGCCGG CGTGAAGATC
GGCGGCGCCC GTCAGGTCGA ATGCACCATC AATGGCCTGG GCGAGCGGGC GGGCAACTGC
TCGCTGGAGG AGATCGTCAT GGCCGTGAAG ACGCGGCGCG ACTACTTCGG CCTGGAACTG
GGCATCGATA CGCAGCACAT CGTGGCCGCC AGCCGCATGG TGAGCCAGAC CACGGGCTTC
GTCGTGCAGC CGAACAAGGC CGTGGTGGGC GCCAACGCCT TCGCCCATGC CAGCGGCATC
CACCAGGACG GCGTGCTCAA GGCCCGCGAT ACCTACGAGA TCATGCGCGC GGAGGACGTG
GGCTGGACCG CCAACAAGAT CGTGCTGGGC AAGCTGAGCG GGCGCAACGC CTTCAAGCAG
CGGCTGCAGG ACCTCGGCGT GCAGCTGGAG AGCGAGGCGG ACGTGAACGC CGCTTTCCTG
CGCTTCAAGG AACTCGCGGA CCGCAAGAGC GAGATCTTCG ACGAGGACAT CCTCGCGCTG
GTCAGCGGCG ACGCCACGGC CGGCGCCGGC GAGCGCTACG GCTTCGTGTC CCTGTCGCAG
CGCAGCGAGA CCGGCGAGCG GCCCCATGCC GCGGTGGTCT TCACCGTGGA CGGCAAGGAG
GTGCATGGCG CATCGGAAGG CAACGGCCCG GTCGATGCAT CGCTCAAGGC CATCGAGTCG
CATGTGCACA GCGGCGCCGA GATGGTGCTG TATTCAGTGA ACGCGATCAG CGGCTCCACG
GAGAGCCAGG GCGAGGTGAC CGTGCGCCTG CAGGACAGCG GGCGGGTCGT CAACGGGGTG
GGGGCGGACC CGGACATCGT CGTCGCGTCA GCCAAAGCCT ACCTGAGCGC GTTGAACAAA
TTGCAAAGCA AAGCCGAGCG CGTGGCTGCG CAAGGCTGA
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| Protein sequence | MSDKLIIFDT TLRDGEQSPG ASMTRDEKLR IARQLERLRV DVIEAGFAAS SNGDFEAVQA
IAQAIKDSTV CSLSRANDRD IARAAEALKD AQRARIHTFI ATSPLHMEKK LRMTPEQVLE
QAKQSVRFAR NLVADIEFSP EDGYRSEPDF LCRVLEAVIA EGATTINVPD TVGYAIPELY
GNFIRNLRER IPNSDKAVWS VHCHNDLGMA VANSLAGVKI GGARQVECTI NGLGERAGNC
SLEEIVMAVK TRRDYFGLEL GIDTQHIVAA SRMVSQTTGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQDLGVQLE SEADVNAAFL
RFKELADRKS EIFDEDILAL VSGDATAGAG ERYGFVSLSQ RSETGERPHA AVVFTVDGKE
VHGASEGNGP VDASLKAIES HVHSGAEMVL YSVNAISGST ESQGEVTVRL QDSGRVVNGV
GADPDIVVAS AKAYLSALNK LQSKAERVAA QG
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