Gene Aave_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3106 
Symbol 
ID4665536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3429886 
End bp3430698 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID639824307 
ProductIclR family transcriptional regulator 
Protein accessionYP_971444 
Protein GI120611766 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.184655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG ACGACGCAGG CGCCTCCTCC AAACCCAGTG TCCAGGTGCT GGAGCGCATG 
TTCACCCTCA TCGACGTGCT CGCCTCGCGG GAAGAAGCCA TTCCCCTGAA GGAAATCAGC
GAGAAGACGG GGCTGCATCC CTCCACCGCG CACCGCATCC TCAACGACCT GTCCCTCGGC
CGCTTCGTGG ACCGGCCCGA ATCGGGCAGC TACCGGCTCG GCATGCGGCT CCTGGAACTG
GGCAACCTCG TCAAGGCCCG GTTGAACGTG CGGGACGCCG CGCTCCTGCC CATGCGCAGC
CTGCACAAGC TGACCCAGCA GCCTGTCAAC CTCAGCATGC GCCAGGGCGA CGAGATCGTC
TATGTCGAGC GGGCCTACAG CGAGCGCTCC GGCATGCAGG TGGTCCGCGC CATAGGCGGC
CGCGCGCCCC TGCACCTGAC ATCCACCGGC AAGCTGTTCC TGGCTGTGGA CGATCCGCAG
CGCGTGCGCG CCTATGCCGT GCGCACCGGG CTGGCAGGCC ACACGCGCAA CAGCATCACC
CAGTTGCCCC AGCTGGAGCG TGAACTGGGC CAGGCCCGGC AGTACGGCAT CGCCCGCGAC
AACGAGGAAC TGGAACTGGG CGTGCGCTGC ATGGCGGCCG GCGTGTTCGA CGACCAGGGC
CAGCTCGTCG CCGGCCTGTC CATTTCCGCC CCGGCCGACC GCCTGGACGA GAACTGGCTG
CCCAAGCTGC AGGCCACCGC GGACGAGATC TCCGCGGCAC TGGGCTATGA CCGCGACCGG
GCCCGGAAGG CCGCCGGCTC GTCGCACCGG TAG
 
Protein sequence
MKKDDAGASS KPSVQVLERM FTLIDVLASR EEAIPLKEIS EKTGLHPSTA HRILNDLSLG 
RFVDRPESGS YRLGMRLLEL GNLVKARLNV RDAALLPMRS LHKLTQQPVN LSMRQGDEIV
YVERAYSERS GMQVVRAIGG RAPLHLTSTG KLFLAVDDPQ RVRAYAVRTG LAGHTRNSIT
QLPQLERELG QARQYGIARD NEELELGVRC MAAGVFDDQG QLVAGLSISA PADRLDENWL
PKLQATADEI SAALGYDRDR ARKAAGSSHR