Gene Aave_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3100 
Symbol 
ID4667289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3423301 
End bp3424116 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID639824299 
Productmethionine aminopeptidase, type I 
Protein accessionYP_971438 
Protein GI120611760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.612073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.249942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCATCAAGTC CGCCGAGGAA ATCGCCGGCA TGCGCGAAGC CTGCCGCCTG 
GCTTCGGAAG TGCTGGACTA CATCACGCCC CACATCCGTC CCGGCATCAC CACGAACGAC
GTGGACCGGC TCGCCGCCGA GTGCATGGCC GCGCAGGGCA CCATCTCGGC CACCATCGGC
TACCAGCCGC CGGGCTACCC GCCCTACCCC AAGTCGCTCT GCACCTCGCT CAACCACGTG
GTCTGCCACG GGATACCGAA CGACAAGCCC CTCAAGAAGG GCGACATCAT GAACGTGGAC
GTCACCGTCA TCACCAAGGA CGGCTGGTAC GGCGACAACA GCCGCATGTA CCTGATCGGC
GACGTCTCCA TCGCCGCGAA GCGCCTGTGC CAGCTCACCT TCGAGGCGAT GTGGCTGGGC
ATCCTGCAGG TGAAGCCGGG AGCGCGCCTG GGCGACATCG GCCACGCCAT CCAGAAATTC
GCCGAAGGCC ACGGCCTGTC TGTCGTGCGC GAATTCTGCG GCCACGGCAT CGGCAAGAAA
TTCCACGAAG AGCCCCAGGT GCTGCACTAC GGCCGCCCCG GCACGCTCGA GGAACTGGTG
CCGGGCATGA CCTTCACCAT CGAGCCCATG CTCAACGCCG GCCGCCGCGA GGTCAAGGAG
CACGGCAACG ACGGCTGGAC CATCGTCACC AAGGACCACA GCCTGTCCGC CCAGTGGGAG
CACACGGTGC TCGTGACCGA AACGGGCTAC GAAGTCCTCA CCCTGTCGGC CGGTTCTCCC
CCGCTGCCTC CGTTCGTCAC CGCCGTGAAG ACCTGA
 
Protein sequence
MSITIKSAEE IAGMREACRL ASEVLDYITP HIRPGITTND VDRLAAECMA AQGTISATIG 
YQPPGYPPYP KSLCTSLNHV VCHGIPNDKP LKKGDIMNVD VTVITKDGWY GDNSRMYLIG
DVSIAAKRLC QLTFEAMWLG ILQVKPGARL GDIGHAIQKF AEGHGLSVVR EFCGHGIGKK
FHEEPQVLHY GRPGTLEELV PGMTFTIEPM LNAGRREVKE HGNDGWTIVT KDHSLSAQWE
HTVLVTETGY EVLTLSAGSP PLPPFVTAVK T