| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3096 |
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| Symbol | |
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| ID | 4669582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3415998 |
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| End bp | 3417785 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824295 |
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| Product | diguanylate phosphodiesterase with GAF sensor |
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| Protein accession | YP_971434 |
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| Protein GI | 120611756 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0665544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.285122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC CGATCAGCGC AGAACAGCAA CGGCTGACGG CCCTGCGGGC CACCGGTCTG
CTGGACACTC CGCCGACCGA GGAGTTCGAC CGCATCACCC GGCTGGCCAG CCGCCTTTTC
GACGTTCCCA TCGCGCTCGT CAGCCTGGTG GACGCGGACC GCCAATGGTT CAAGTCGCAG
ATCGGGTTGC CGGTCCGCGA AACCTGCCGC GAGGATGCCT TCTGCGATCA CACCATCCGA
ACCTCCGAGG TCATGGTCGT GGAAGACGCG CTGCAGGATC CACGTTTCGC CGCCAATCCG
CTCGTCCAGG GGCCACCGCA CATCCGCTTC TATGCCGGCG CGCCCCTGAT CCTGCGGGGC
CACCACCACC TGGGCAGCCT GTGCCTCATC GACTCCGTGC CCCGTGCGTT CGATACCGCA
CAGCAGCGGC AACTGGCAGA CCTGGCCGCG CTGGTGATGG CCCAGATCGA CCTGCAGTGC
GCCGCCGCGC GCCTGGACGA ATCCACCCTG CTGCCGAACC GGACGCAACT GCTGCAGGAC
CTCCATGGGC TGTGCCTGGC GGCGCCCGGC GAGCAGCGCG TGCTGGTCCT GCTCGAACTC
CTGCCGCACG ACGGCATCAT GGATGCCGCC CGCGCCATCG GCATGCAGCC CATCGAACAG
CTGACCTACG AGGCGGGCAG GCGGCTGGCC GGCTTCGTCG GCAGCCAGTC CCGCGTGTAC
CACACCGGCG TTGCCCGGCT GGCCCTCGTG CTGCGGGACA CCGACGGACA GACCGTGGCG
CAATTCACGC AGCAATTGCT GGACACCCTG GCCGCGCCGC TGTCCACGGG CTCGGGCATC
GTCATCAACC AGCGGCGACG CATCGGCCTG GCCCCCTTCA CGCTGGAGCC GGCGGACGCC
GTCGATTCCC TGCGGCGCGC CAACGCCGCG CTCTACCACC AGCCGATGTC CGGCACGGCG
GTCTGCAGCT ACGACGCCGC GGTGGACCTC AGCTACCGCC GCTCCTACGA GCTGATGGCC
AGCATCCCCC GTGCGCTGAT GGCGGGAGAA TTCCGGCTCG TGTACCAGCC CCAGTTCGAG
CGTGCTTCCA CGCGCTACAC CTGCATGGAG GCCCTGCTGC GCTGGGACCA TCCCCAACTG
GGTACGGTGT CACCCGGCGA CTTCATTCCC CTGCTGGAAA AGACCACCTA CATCCAGGCC
GTCACCGAAT GGGTGCTGCA CACGGCGCTG GCGCAGGTCC GCGCGTGGGA AGACGCCGGC
CTGGAGGTGG ACGTGGCGAT CAACGTGTCG CCGCGCAACC TCGAGCAGCC CGGGTTCGCC
GGCATGCTCC GGGATGCCTT CGCCCGGCAC AGGCTCGCCC CATCGCGCCT CGAGATCGAG
TGCACCGAAA ACGCCGTGCT GACGGAAGGC CCCACGCTGG AAGGCATCAA GGCGGCCCGC
GCAATGGGCG TGCGCGTGGC GCTCGACGAT TTCGGCACCG GCTACTGCAA TTTCGGGTGC
CTCTACGACC TCTCGGCCGA GGTACTCAAG CTCGACCAGG CCCTGATCCG GCCCATCGGG
ACCGATGCCC GCGCGCTCGA TGTCGTGCGC GGCATGGTCC AGCTCGGCCA CACCCTGGGC
TACCGCCTCC TGGCCGAAGG CGTGGAAACC GCCGAAGTGT TCGACCAGCT CATGGAGCTC
GGCTGCGACC AGGTGCAGGG CTATTACCTG AGCCGCCCCC TGCCGCCCGC CGAGGCCTTC
GCCTTCGTGC ATCGCTGGAA CCGGCTCGTC ACGCTCGAGC AGGGCTGA
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| Protein sequence | MTLPISAEQQ RLTALRATGL LDTPPTEEFD RITRLASRLF DVPIALVSLV DADRQWFKSQ
IGLPVRETCR EDAFCDHTIR TSEVMVVEDA LQDPRFAANP LVQGPPHIRF YAGAPLILRG
HHHLGSLCLI DSVPRAFDTA QQRQLADLAA LVMAQIDLQC AAARLDESTL LPNRTQLLQD
LHGLCLAAPG EQRVLVLLEL LPHDGIMDAA RAIGMQPIEQ LTYEAGRRLA GFVGSQSRVY
HTGVARLALV LRDTDGQTVA QFTQQLLDTL AAPLSTGSGI VINQRRRIGL APFTLEPADA
VDSLRRANAA LYHQPMSGTA VCSYDAAVDL SYRRSYELMA SIPRALMAGE FRLVYQPQFE
RASTRYTCME ALLRWDHPQL GTVSPGDFIP LLEKTTYIQA VTEWVLHTAL AQVRAWEDAG
LEVDVAINVS PRNLEQPGFA GMLRDAFARH RLAPSRLEIE CTENAVLTEG PTLEGIKAAR
AMGVRVALDD FGTGYCNFGC LYDLSAEVLK LDQALIRPIG TDARALDVVR GMVQLGHTLG
YRLLAEGVET AEVFDQLMEL GCDQVQGYYL SRPLPPAEAF AFVHRWNRLV TLEQG
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